Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.58□□□□□ -1.36
USB1Q9BQ65 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
USB1Q9BQ65 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC005839.1-201ENST00000624148 3213 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AP003486.1-201ENST00000525716 3994 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 RNU6-960P-201ENST00000364056 120 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 Y_RNA.399-201ENST00000383955 105 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 RN7SKP117-201ENST00000410175 264 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 FAR2P4-202ENST00000425399 584 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC092162.1-201ENST00000432828 434 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AL451074.4-201ENST00000447545 470 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 SNORD121B-201ENST00000458838 81 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 RPL7P5-201ENST00000471472 736 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC087879.1-201ENST00000474343 374 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 RNU6-1092P-201ENST00000516955 87 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 RNU6-64P-201ENST00000517119 105 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 RN7SKP92-201ENST00000517266 244 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 RNU6-323P-201ENST00000521915 107 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC022080.3-201ENST00000544433 482 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC079600.1-201ENST00000550326 297 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC026371.1-201ENST00000551867 419 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 SETP7-201ENST00000552169 453 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC007342.5-201ENST00000571340 2142 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 MIR4504-201ENST00000577413 92 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 RN7SL42P-201ENST00000579786 294 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 RN7SL835P-201ENST00000579920 262 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 COX6CP16-201ENST00000603667 216 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC019257.2-201ENST00000605539 497 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC009570.1-201ENST00000609599 745 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 SDR42E1P2-201ENST00000614861 481 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 SDR42E1P4-201ENST00000620894 481 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 Z95327.2-201ENST00000414579 1873 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC005614.1-201ENST00000598952 3653 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 AC005261.2-201ENST00000593427 4258 ntBASIC6.57□□□□□ -1.36
USB1Q9BQ65 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.57□□□□□ -1.36
USB1Q9BQ65 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 Y_RNA.64-201ENST00000362845 102 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RN7SKP63-201ENST00000363187 301 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 Y_RNA.150-201ENST00000363562 102 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RNU6-432P-201ENST00000384196 109 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 PTMAP8-201ENST00000397729 342 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
USB1Q9BQ65 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 RN7SKP131-201ENST00000410698 301 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RN7SKP126-201ENST00000411143 300 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 SNX18P13-201ENST00000412442 529 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 AL022100.1-202ENST00000421214 548 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 EEF1GP7-201ENST00000422983 703 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RPL21P112-201ENST00000434403 463 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USB1Q9BQ65 RPL23AP60-201ENST00000450011 454 ntBASIC6.56□□□□□ -1.36
USB1Q9BQ65 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms