Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OR52B5P-201ENST00000435337 951 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 NPM1P39-201ENST00000449818 867 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RPSAP50-201ENST00000481955 852 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 DUTP1-201ENST00000493631 470 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC117522.3-201ENST00000507974 584 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 MTND5P4-201ENST00000514978 288 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC109635.6-201ENST00000525487 1113 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 GTF2IP11-201ENST00000526931 420 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 POLR2KP1-201ENST00000553226 168 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 MIR4311-201ENST00000580794 100 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 MIR548Y-201ENST00000582739 110 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL596327.1-201ENST00000603629 213 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC010200.2-201ENST00000605098 235 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AC000068.2-201ENST00000608816 460 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL359880.1-201ENST00000621879 266 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 AL359955.1-201ENST00000455242 3275 ntBASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
SYNGAP1Q96PV0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC012078.1-201ENST00000405035 1646 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 CDR1-202ENST00000625883 1485 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 Y_RNA.89-201ENST00000363031 102 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 RNU6-839P-201ENST00000363347 108 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 RNU11-201ENST00000387069 134 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC245028.1-201ENST00000423259 256 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 MTCO1P20-201ENST00000425366 358 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 RPS27AP6-201ENST00000427962 448 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AP001324.1-201ENST00000428553 399 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 BMS1P19-201ENST00000433925 393 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 RPL15P21-201ENST00000495592 567 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 HMGN1P12-201ENST00000499125 195 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC108078.1-201ENST00000508073 725 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 IMPA1P1-201ENST00000510718 842 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 snoU109.5-201ENST00000516231 132 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AP002812.4-201ENST00000532139 286 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AK6P1-201ENST00000540219 478 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 MIR4646-201ENST00000580775 63 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AL360012.1-201ENST00000602813 131 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 PRELID3BP8-201ENST00000604148 295 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC008277.2-201ENST00000605196 797 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC108479.2-201ENST00000617314 601 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC000095.2-202ENST00000637415 154 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 AC092070.2-203ENST00000598377 3644 ntBASIC6.36□□□□□ -1.39
SYNGAP1Q96PV0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
SYNGAP1Q96PV0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SYNGAP1Q96PV0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNGAP1Q96PV0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNGAP1Q96PV0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms