Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 XIAPP3-201ENST00000312918 795 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 SNORA62.2-201ENST00000364672 152 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 RNA5SP283-201ENST00000365604 119 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC083799.1-201ENST00000366451 910 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 RNU6-185P-201ENST00000384421 107 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 GSTM3P2-201ENST00000412746 530 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AMD1P2-201ENST00000412936 992 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AL691449.1-201ENST00000426570 421 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 NANOGP6-201ENST00000429190 847 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 HMGB1P5-202ENST00000451497 985 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC107398.1-201ENST00000486904 505 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 FTH1P9-201ENST00000513251 355 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 RNU6-760P-201ENST00000516078 97 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 IFITM8P-201ENST00000522529 394 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AL161713.1-201ENST00000555538 145 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MTATP6P25-201ENST00000574491 261 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MTCO3P22-201ENST00000603219 784 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC008785.1-201ENST00000624475 456 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 AC025125.1-201ENST00000624743 1922 ntBASIC4.18□□□□□ -1.74
RPRD1AQ96P16 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.18□□□□□ -1.74
RPRD1AQ96P16 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 RNA5SP388-201ENST00000362584 119 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 MIR1193-201ENST00000408109 78 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC092017.2-201ENST00000427600 362 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 PPIAP17-201ENST00000438507 471 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 EXTL2P1-201ENST00000446218 416 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AP000926.1-201ENST00000479573 241 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC110792.1-201ENST00000491826 472 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 SUMO1P1-201ENST00000497904 306 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC022790.1-201ENST00000522872 204 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 OR8R1P-201ENST00000543943 764 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC012414.2-201ENST00000559474 187 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC079171.1-201ENST00000568788 914 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 MIR4458-201ENST00000578872 75 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC115621.1-201ENST00000604653 858 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
RPRD1AQ96P16 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.17□□□□□ -1.74
RPRD1AQ96P16 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 RNA5SP515-201ENST00000364570 118 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 SNORA27.3-201ENST00000364937 134 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 SNORA37-201ENST00000384504 129 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 PPIAP31-201ENST00000405422 495 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 RANP4-201ENST00000413361 655 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 RPL30P3-201ENST00000424262 333 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC011037.1-201ENST00000483964 558 ntBASIC4.16□□□□□ -1.74
RPRD1AQ96P16 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RPRD1AQ96P16 AC108157.1-201ENST00000510511 539 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms