Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MIR3176-201ENST00000582210 90 ntBASIC3.34□□□□□ -1.87
AP3S1Q92572 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.34□□□□□ -1.87
AP3S1Q92572 AL161729.3-201ENST00000603533 673 ntBASIC3.34□□□□□ -1.87
AP3S1Q92572 AC092653.1-201ENST00000608509 531 ntBASIC3.34□□□□□ -1.87
AP3S1Q92572 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.34□□□□□ -1.87
AP3S1Q92572 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
AP3S1Q92572 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
AP3S1Q92572 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
AP3S1Q92572 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
AP3S1Q92572 MFSD8-236ENST00000641509 4050 ntBASIC3.34□□□□□ -1.88
AP3S1Q92572 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.88
AP3S1Q92572 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.34□□□□□ -1.88
AP3S1Q92572 DHX40P1-201ENST00000588725 1412 ntBASIC3.34□□□□□ -1.88
AP3S1Q92572 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
AP3S1Q92572 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
AP3S1Q92572 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 RNA5SP189-201ENST00000364920 115 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3S1Q92572 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 MIR153-1-201ENST00000384914 90 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AP000893.1-201ENST00000474462 794 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 TRBV8-2-201ENST00000475637 270 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC108941.1-201ENST00000502853 530 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3S1Q92572 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.33□□□□□ -1.88
AP3S1Q92572 RNU6-319P-201ENST00000516025 108 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 RNA5SP34-201ENST00000516887 130 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC087369.1-201ENST00000520775 996 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AP001636.2-201ENST00000525517 696 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AP000676.2-201ENST00000529711 301 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 PTP4A1P6-201ENST00000531034 478 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 TRAV8-5-201ENST00000537369 341 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3S1Q92572 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
AP3S1Q92572 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AC011445.2-201ENST00000599274 173 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AL391834.1-201ENST00000609609 560 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 RMST_5.1-201ENST00000618704 126 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC092628.2-201ENST00000622492 339 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 AC011944.2-201ENST00000624440 683 ntBASIC3.33□□□□□ -1.88
AP3S1Q92572 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP3S1Q92572 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
AP3S1Q92572 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
AP3S1Q92572 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
AP3S1Q92572 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3S1Q92572 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
AP3S1Q92572 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3S1Q92572 CHEK2P5-201ENST00000423877 246 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.32□□□□□ -1.88
AP3S1Q92572 RPL36AP15-201ENST00000444514 266 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3S1Q92572 AC239367.2-201ENST00000447309 705 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 HMGB3P8-201ENST00000449709 577 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3S1Q92572 RNU7-27P-201ENST00000459281 62 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.32□□□□□ -1.88
AP3S1Q92572 AL132838.2-201ENST00000492041 314 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3S1Q92572 AC008953.1-201ENST00000497334 318 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3S1Q92572 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3S1Q92572 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.32□□□□□ -1.88
AP3S1Q92572 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.32□□□□□ -1.88
AP3S1Q92572 OR4A2P-201ENST00000527276 913 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 AL163642.2-201ENST00000604722 1019 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 AC018754.1-201ENST00000607486 925 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
AP3S1Q92572 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 ZNF33CP-201ENST00000432492 2030 ntBASIC3.32□□□□□ -1.88
AP3S1Q92572 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP3S1Q92572 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP3S1Q92572 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP3S1Q92572 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
AP3S1Q92572 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms