Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NUP43Q8NFH3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 GNG5P1-201ENST00000255500 204 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 FRG1BP-201ENST00000278882 761 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 OR9K1P-201ENST00000326513 941 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 FRG1CP-201ENST00000358464 769 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.162-201ENST00000363683 102 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RNU6-1227P-201ENST00000383981 107 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RNU6-317P-201ENST00000384031 107 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 Z97832.1-201ENST00000402490 328 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL136131.1-201ENST00000406079 803 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 MIR320C1-201ENST00000408566 88 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL353193.1-201ENST00000421444 268 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL589872.1-201ENST00000426602 288 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RPL31P35-201ENST00000431058 377 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RNU6-420P-201ENST00000458780 107 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RN7SL57P-201ENST00000493687 290 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LSM3P4-201ENST00000502948 309 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC105384.2-201ENST00000508433 640 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 PCNAP4-201ENST00000532690 730 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC090502.2-201ENST00000549267 280 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC126615.2-201ENST00000553003 515 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 HIF1AP1-201ENST00000553642 175 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC011840.5-201ENST00000582125 771 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 CKS1BP3-201ENST00000600888 237 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC020910.2-201ENST00000603635 610 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RPL12P48-201ENST00000605620 304 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC093388.1-201ENST00000609166 430 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 MIR6862-1-201ENST00000613016 70 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 MIR6862-2-201ENST00000614755 70 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL732618.1-201ENST00000623251 301 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC000095.2-202ENST00000637415 154 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 BCORP1-203ENST00000513194 5093 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL442128.2-201ENST00000620246 1824 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AL355488.2-201ENST00000609909 2850 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 ZNF658B-201ENST00000602828 3408 ntBASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP43Q8NFH3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC011933.2-201ENST00000578539 2790 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC004656.1-201ENST00000568479 4951 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RNU4-79P-201ENST00000362764 141 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.72-201ENST00000362894 103 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RNA5SP91-201ENST00000390902 119 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RN7SKP29-201ENST00000410957 272 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MTND3P17-201ENST00000416968 344 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 BX284632.2-201ENST00000421091 399 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RAD23BP1-201ENST00000421404 1227 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms