Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 AC022882.1-201ENST00000532142 501 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 AC084757.4-201ENST00000616350 526 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 FAM35DP-201ENST00000323387 2712 ntBASIC5.5□□□□□ -1.53
VPS8Q8N3P4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS8Q8N3P4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 RPS20P1-201ENST00000434853 354 ntBASIC5.49□□□□□ -1.53
VPS8Q8N3P4 RPS3AP50-201ENST00000487064 803 ntBASIC5.49□□□□□ -1.53
VPS8Q8N3P4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 AC006946.3-201ENST00000609791 756 ntBASIC5.49□□□□□ -1.53
VPS8Q8N3P4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS8Q8N3P4 AC234772.1-201ENST00000377927 937 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 MIR7-3-201ENST00000384898 110 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 MTND4P22-201ENST00000413116 1169 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 HSFY4P-201ENST00000415994 1181 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 DNAJC19P1-201ENST00000455312 319 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC023598.1-201ENST00000472521 361 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC026784.1-201ENST00000507986 352 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC099489.2-201ENST00000574976 260 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 MIR7851-201ENST00000610611 160 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 PTMAP5-201ENST00000393073 333 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 MTCO1P12-201ENST00000414273 1543 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC010307.1-201ENST00000467206 836 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC068647.1-201ENST00000489539 2265 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC026333.2-201ENST00000542164 106 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 AC243654.2-201ENST00000612843 443 ntBASIC5.48□□□□□ -1.53
VPS8Q8N3P4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS8Q8N3P4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 SNORA11.1-201ENST00000408133 129 ntBASIC5.47□□□□□ -1.53
VPS8Q8N3P4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 DUXAP6-201ENST00000553858 601 ntBASIC5.47□□□□□ -1.53
VPS8Q8N3P4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 AC020914.4-201ENST00000597690 277 ntBASIC5.47□□□□□ -1.53
VPS8Q8N3P4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS8Q8N3P4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.46□□□□□ -1.53
VPS8Q8N3P4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
VPS8Q8N3P4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 NMD3P1-201ENST00000439704 1488 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 RSL24D1P1-201ENST00000404972 493 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AL035458.1-201ENST00000433096 585 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 RPL23AP83-201ENST00000434984 473 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AC005019.1-201ENST00000436455 431 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AC068790.5-201ENST00000602741 355 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.46□□□□□ -1.54
VPS8Q8N3P4 AC244205.2-202ENST00000635781 342 ntBASIC5.46□□□□□ -1.54
VPS8Q8N3P4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS8Q8N3P4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms