Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RNU6-641P-201ENST00000384006 107 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AL592114.1-201ENST00000403842 483 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RPS4XP9-201ENST00000405151 780 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 MIR548K-201ENST00000408406 116 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RPL31P2-201ENST00000413849 377 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 CYP4F34P-201ENST00000425951 481 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AMYP1-201ENST00000440059 1023 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AL022237.1-201ENST00000446663 358 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RNU6-1208P-201ENST00000459588 107 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RPS10P28-201ENST00000480396 498 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC068305.1-201ENST00000497406 726 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 TECRP2-201ENST00000503270 928 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AP001804.3-201ENST00000525146 880 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 OR7E161P-201ENST00000533722 967 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AL031666.3-201ENST00000609320 1006 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AL031658.2-201ENST00000616850 651 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AP000843.1-201ENST00000624880 701 ntBASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
DEPDC4Q8N2C3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 MTND4P14-201ENST00000435799 1354 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 OR2M1P-201ENST00000318104 951 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 RNU6-1029P-201ENST00000384109 107 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 Y_RNA.459-201ENST00000384251 102 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 SNORA11.5-201ENST00000408163 128 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 RNU2-21P-201ENST00000410368 188 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC245054.2-201ENST00000415639 319 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 RPS17P17-201ENST00000419392 409 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 UBBP5-201ENST00000446970 266 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC107399.1-201ENST00000451226 265 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL353691.1-201ENST00000451332 387 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 SNRPFP3-201ENST00000457792 225 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 SNORA81.1-201ENST00000458922 177 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 RPL23AP8-201ENST00000479812 475 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC025271.1-201ENST00000485045 429 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 ALDH7A1P3-201ENST00000492517 345 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 HMGB1P41-201ENST00000520234 440 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AP000857.1-201ENST00000532151 543 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC006512.2-201ENST00000543250 486 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AL355836.1-201ENST00000555951 870 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC019322.1-201ENST00000571869 389 ntBASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.35□□□□□ -1.39
DEPDC4Q8N2C3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms