Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC092754.2-201ENST00000463506 460 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC041039.1-201ENST00000485656 536 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC026414.1-201ENST00000504046 698 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC010546.1-201ENST00000569391 485 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 RN7SL176P-201ENST00000580352 264 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AL158163.2-201ENST00000619110 700 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC092376.2-201ENST00000622621 4116 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC090017.1-201ENST00000548612 1779 ntBASIC5.67□□□□□ -1.5
SYNE4Q8N205 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE4Q8N205 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE4Q8N205 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 HMGB1P10-201ENST00000395823 563 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 SETP15-201ENST00000412724 337 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC008173.1-201ENST00000418901 264 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AL365203.2-201ENST00000423444 196 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 CKS1BP6-201ENST00000424932 240 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 ACTR3P2-201ENST00000439585 1257 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 RPL6P5-201ENST00000445678 828 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AL935212.3-201ENST00000450729 284 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 HMGB1P5-202ENST00000451497 985 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 NECAP1P2-201ENST00000455668 727 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 RN7SL98P-201ENST00000462271 300 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC108734.3-201ENST00000481241 1165 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 MTCO2P32-201ENST00000514865 403 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 SNORA67.7-201ENST00000516664 135 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC023632.4-201ENST00000517783 191 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AP003730.1-201ENST00000524605 285 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 NDUFS5P6-201ENST00000529136 295 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC006130.2-201ENST00000586202 326 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AP000811.1-201ENST00000603803 651 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC013468.1-201ENST00000608680 598 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC072039.2-201ENST00000608883 439 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC006133.1-201ENST00000617106 264 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 BX005019.1-201ENST00000561881 1810 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC015813.6-201ENST00000624409 5808 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 AC125257.1-201ENST00000560400 2930 ntBASIC5.66□□□□□ -1.5
SYNE4Q8N205 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SYNE4Q8N205 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE4Q8N205 AL049737.1-201ENST00000413920 1403 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 CYP1D1P-201ENST00000416662 1433 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 SNORD56.4-201ENST00000363883 71 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNU1-132P-201ENST00000364300 164 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNU1-13P-201ENST00000384499 162 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 SNORA11.1-201ENST00000408133 129 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNA5SP317-201ENST00000410176 116 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNU4-74P-201ENST00000411280 161 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 RNA5SP311-201ENST00000411290 116 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 NRBF2P2-201ENST00000413087 861 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 MTND4P3-201ENST00000417829 541 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 MTND5P2-201ENST00000442927 1142 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 PHBP16-201ENST00000446318 950 ntBASIC5.65□□□□□ -1.5
SYNE4Q8N205 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE4Q8N205 AL096803.2-201ENST00000450032 677 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms