Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC71Q8IV32 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC71Q8IV32 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 HSPD1P11-201ENST00000508643 1702 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AP001486.2-201ENST00000561652 5113 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 PNPT1P2-201ENST00000456768 2050 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 METTL21EP-201ENST00000298105 713 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 RNA5SP388-201ENST00000362584 119 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 SNORD56.4-201ENST00000363883 71 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 MIR3074-201ENST00000384885 81 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 TCEA1P4-201ENST00000415066 844 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 RPS26P47-201ENST00000427219 348 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 RPS20P1-201ENST00000434853 354 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 RPL23AP89-201ENST00000439324 255 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC122718.1-201ENST00000439448 744 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 UBE2V1P3-201ENST00000439651 417 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AL096829.2-201ENST00000446582 742 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC012671.1-201ENST00000451912 203 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 RN7SL98P-201ENST00000462271 300 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 FAM133DP-201ENST00000464802 691 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC105137.1-201ENST00000484355 562 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 IGLVIV-53-201ENST00000520107 367 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AP000827.1-201ENST00000527814 258 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 VN1R85P-201ENST00000601587 426 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 BNIP3P31-201ENST00000604515 566 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC021851.1-201ENST00000608537 1082 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC008759.3-201ENST00000613300 508 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC006213.4-201ENST00000616184 634 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AL391262.2-201ENST00000622466 494 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC138907.10-201ENST00000623708 983 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC010872.1-201ENST00000624225 675 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC008785.1-201ENST00000624475 456 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 GTF2H2B-203ENST00000508065 1432 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC006971.1-201ENST00000407916 4486 ntBASIC4.01□□□□□ -1.77
CCDC71Q8IV32 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC097504.1-201ENST00000515103 2415 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71Q8IV32 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 RNU1-130P-201ENST00000363930 160 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 SNORA37-201ENST00000384504 129 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 SNORD66.1-201ENST00000391230 76 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC093719.1-202ENST00000392735 373 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71Q8IV32 RPL23AP26-201ENST00000412728 464 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC008173.1-201ENST00000418901 264 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 DNAJA1P1-201ENST00000425106 1187 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 MRPL50P1-201ENST00000431951 384 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 AL353597.2-202ENST00000434901 373 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 ACTR3P2-201ENST00000439585 1257 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AL353093.1-201ENST00000441292 436 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 CDC27P1-201ENST00000445384 715 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 EIF4A1P11-201ENST00000451239 222 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 HMGB3P22-202ENST00000451823 572 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71Q8IV32 RPL7P19-201ENST00000469948 618 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC007537.2-201ENST00000472093 511 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71Q8IV32 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71Q8IV32 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CCDC71Q8IV32 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AP003355.1-201ENST00000518956 587 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AP000916.1-201ENST00000533869 835 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC068339.2-201ENST00000534395 618 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71Q8IV32 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71Q8IV32 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4□□□□□ -1.77
CCDC71Q8IV32 NPM1P47-201ENST00000560843 856 ntBASIC4□□□□□ -1.77
CCDC71Q8IV32 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms