Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC139426.3-201ENST00000605648 2059 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 NAMPTP1-201ENST00000440465 2514 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC097504.1-201ENST00000515103 2415 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RNA5SP188-201ENST00000362916 129 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RN7SKP250-201ENST00000363924 321 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-1062P-201ENST00000383908 107 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 Y_RNA.530-201ENST00000384587 101 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 Y_RNA.556-201ENST00000384677 113 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AL096800.1-201ENST00000405326 893 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 MRPS21P5-201ENST00000417885 231 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC018865.2-201ENST00000423631 129 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC083862.1-201ENST00000427378 1242 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC006548.1-201ENST00000427470 102 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC003989.1-201ENST00000434569 565 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 HMGB3P11-201ENST00000440127 604 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RPS23P9-201ENST00000448848 438 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC104308.1-201ENST00000454621 333 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RNU7-66P-201ENST00000459469 62 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC022206.1-201ENST00000495947 347 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC110794.1-201ENST00000505816 425 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RN7SKP24-201ENST00000515888 284 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RN7SKP70-201ENST00000516655 271 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 HAUS8P1-201ENST00000549005 542 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC013244.1-201ENST00000604279 193 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC007485.1-201ENST00000616755 206 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 CR381572.1-201ENST00000625098 102 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 HDAC1P2-201ENST00000453661 1398 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 RNF6P1-201ENST00000444889 1784 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SMG1P5-202ENST00000529428 4219 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SMG1P2-201ENST00000566127 4221 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC074141.1-201ENST00000588129 2995 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AL137058.3-201ENST00000624531 3099 ntBASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.51□□□□□ -1.37
LYSMD3Q7Z3D4 AC119744.1-201ENST00000454746 1715 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AC010624.4-201ENST00000597606 1351 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-238P-201ENST00000363313 106 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 RN7SKP144-201ENST00000411108 279 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 AP000534.2-201ENST00000412729 568 ntBASIC6.5□□□□□ -1.37
LYSMD3Q7Z3D4 TPMTP2-201ENST00000414372 726 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms