Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 HNRNPKP5-201ENST00000515300 253 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 SERPINE4P-201ENST00000554978 281 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 OR1AB1P-201ENST00000585564 761 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 ELOCP28-201ENST00000590044 317 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC008745.1-201ENST00000604064 271 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC113403.1-201ENST00000604910 193 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC096586.1-201ENST00000610267 561 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC105429.2-201ENST00000610567 517 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 uc_338.13-201ENST00000618243 179 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC097460.3-201ENST00000623099 442 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AL356094.1-201ENST00000624663 1212 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 ZNF33CP-201ENST00000432492 2030 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NIPAL3Q6P499 AC083899.2-201ENST00000423285 1376 ntBASIC3.88□□□□□ -1.79
NIPAL3Q6P499 ASNSP1-204ENST00000641977 1664 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RNA5SP175-201ENST00000364275 119 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RNU6-1293P-201ENST00000384077 107 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 MIR153-1-201ENST00000384914 90 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC136624.1-201ENST00000400791 413 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RNA5SP39-201ENST00000411245 120 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL161631.1-201ENST00000417933 486 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RPL31P45-201ENST00000419532 356 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RPS27AP7-201ENST00000422792 455 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL390879.2-203ENST00000426943 1121 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RPL7P4-203ENST00000430239 730 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 MTCO1P43-201ENST00000431831 488 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL512661.1-201ENST00000434586 1253 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 DNAJC19P8-201ENST00000452887 259 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RN7SL98P-201ENST00000462271 300 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RN7SL585P-201ENST00000470538 280 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RPL21P103-201ENST00000479921 488 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC006517.1-201ENST00000480485 328 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC126121.1-201ENST00000482313 553 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RN7SL810P-201ENST00000493031 276 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC139783.2-201ENST00000504847 1145 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC083899.3-201ENST00000603413 594 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 LLPHP1-201ENST00000603571 367 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC012603.1-201ENST00000606424 528 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AL121873.1-201ENST00000616013 524 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 RNU6-156P-201ENST00000621869 107 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 AC092608.3-201ENST00000625017 386 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 NSRP1P1-201ENST00000444067 1693 ntBASIC3.87□□□□□ -1.79
NIPAL3Q6P499 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NIPAL3Q6P499 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 EIF2AP4-201ENST00000424793 1781 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 DNAJC19P6-201ENST00000401853 280 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 ATP5F1P6-201ENST00000402768 767 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 SNORA11C-201ENST00000408532 129 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 ELOCP19-201ENST00000411919 318 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 AL139095.3-201ENST00000419672 1203 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 AL606495.1-201ENST00000422100 813 ntBASIC3.86□□□□□ -1.79
NIPAL3Q6P499 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.86□□□□□ -1.79
NIPAL3Q6P499 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms