Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC022133.1-201ENST00000490961 571 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 MRPS33P2-201ENST00000507850 322 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC008494.2-201ENST00000514544 370 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC092709.1-201ENST00000521355 1045 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AP001317.1-201ENST00000531194 960 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 PARP1P2-201ENST00000556806 195 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AP001094.1-201ENST00000579805 193 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL451074.6-201ENST00000608512 729 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC131235.4-201ENST00000609288 620 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC019193.2-201ENST00000610012 634 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC243654.2-201ENST00000612843 443 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC023158.2-201ENST00000614876 543 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC103706.2-201ENST00000638080 240 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 OR2L1P-202ENST00000641567 1023 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL450345.1-202ENST00000605741 3881 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SLC44A4Q53GD3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.21□□□□□ -1.57
SLC44A4Q53GD3 AP000776.1-201ENST00000530032 1663 ntBASIC5.21□□□□□ -1.57
SLC44A4Q53GD3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SLC44A4Q53GD3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
SLC44A4Q53GD3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 Z99496.1-201ENST00000469424 1477 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AL161909.1-201ENST00000397390 712 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RNU4-72P-201ENST00000410754 173 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 BTF3L4P1-201ENST00000413813 468 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC069213.2-201ENST00000420238 366 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 MRPS36P1-201ENST00000421291 307 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AL139421.1-201ENST00000423010 169 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 MTND5P2-201ENST00000442927 1142 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 OR7E125P-201ENST00000443450 846 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RPL36AP15-201ENST00000444514 266 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RPL7P59-201ENST00000447700 943 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RNU7-125P-201ENST00000458760 62 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RN7SL189P-201ENST00000468631 289 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC011005.3-201ENST00000491624 395 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 MYL12BP2-201ENST00000503948 512 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC104090.1-201ENST00000506341 1171 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC087808.1-201ENST00000520501 361 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AP000619.3-201ENST00000535634 1127 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 TOMM20P2-201ENST00000540082 421 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 MIR5096-201ENST00000583713 70 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 BNIP3P26-201ENST00000600827 554 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AP003973.1-201ENST00000604639 691 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 HULC.1-201ENST00000612720 240 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 CDRT1-208ENST00000630868 794 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC116618.1-201ENST00000634617 774 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 OR8B1P-202ENST00000641132 1178 ntBASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC44A4Q53GD3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 567 ms