Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL355816.1-201ENST00000607951 118 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC092653.1-201ENST00000608509 531 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC243756.2-201ENST00000618406 463 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC015804.1-201ENST00000622935 435 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC007494.3-201ENST00000624660 743 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 CR392039.4-201ENST00000624968 501 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC026634.1-201ENST00000634369 198 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 AC100778.3-201ENST00000580060 1750 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 THAP12P4-201ENST00000528321 2266 ntBASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTCHD3Q3KNS1 CR381670.1-201ENST00000624291 1693 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC104260.2-201ENST00000623551 3497 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 SNORA51.8-201ENST00000384234 132 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL355379.1-201ENST00000405542 640 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RPL23AP47-201ENST00000408017 460 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RPS15AP38-201ENST00000413110 372 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 DDX39BP1-205ENST00000422507 192 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC244035.1-201ENST00000430042 390 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RPS26P40-201ENST00000435209 294 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RHOT1P3-201ENST00000436571 331 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RPS29P9-201ENST00000440360 171 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 Z80107.2-201ENST00000445127 392 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 HMGN2P25-201ENST00000486956 268 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC080014.1-201ENST00000496877 1201 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 KLRA1P-201ENST00000503499 986 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 MTCO3P7-201ENST00000510008 774 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 MTCO1P30-201ENST00000515244 580 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-347P-201ENST00000516658 105 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RN7SKP260-201ENST00000516907 149 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AF279873.1-201ENST00000523393 313 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC012339.2-201ENST00000523996 453 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 OR5AK1P-201ENST00000524837 922 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 OR5D15P-201ENST00000531671 942 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC093519.1-201ENST00000566109 298 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC103987.3-201ENST00000582071 292 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 MIR4691-201ENST00000583764 85 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC105254.2-201ENST00000603636 436 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC064872.1-201ENST00000604823 1072 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC073869.10-201ENST00000642016 354 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 AC107982.1-201ENST00000507171 1300 ntBASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTCHD3Q3KNS1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 CDR1-202ENST00000625883 1485 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 AL390862.1-201ENST00000635467 1469 ntBASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTCHD3Q3KNS1 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms