Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PPIAP15-201ENST00000479662 484 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 RPS3AP6-201ENST00000484430 795 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC074029.2-201ENST00000551045 634 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC022884.3-201ENST00000579571 248 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 uc_338.9-201ENST00000617424 182 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC000123.2-201ENST00000623124 461 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 ZNF285B-201ENST00000561698 1767 ntBASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHROOM1Q2M3G4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC139713.2-215ENST00000641428 5037 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 SNORA60-201ENST00000362396 134 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 RNA5SP387-201ENST00000364226 106 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 HMGB3P19-201ENST00000403971 560 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 RNA5SP44-201ENST00000410446 133 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC104306.1-201ENST00000449702 371 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC133473.1-201ENST00000455173 299 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 TPRKBP1-201ENST00000456243 481 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC005229.2-201ENST00000456995 399 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 OR52A4P-202ENST00000481634 799 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 CDH12P2-201ENST00000504393 298 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 FABP5P6-201ENST00000510588 409 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC012414.2-201ENST00000559474 187 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 MIR4458-201ENST00000578872 75 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC244505.7-201ENST00000599675 272 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC010680.3-201ENST00000604215 520 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC003001.2-201ENST00000616294 831 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 AC105074.1-201ENST00000623380 3095 ntBASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.66□□□□□ -1.66
SHROOM1Q2M3G4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM1Q2M3G4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.65□□□□□ -1.66
SHROOM1Q2M3G4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM1Q2M3G4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.65□□□□□ -1.66
SHROOM1Q2M3G4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.65□□□□□ -1.66
SHROOM1Q2M3G4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SHROOM1Q2M3G4 SCN1A-220ENST00000641603 12506 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AL589655.1-201ENST00000405398 482 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC068533.1-201ENST00000418542 415 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AL139247.1-201ENST00000422768 325 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 NPM1P34-201ENST00000428821 893 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC006946.1-201ENST00000429106 328 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC091286.1-201ENST00000431233 461 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 Z74696.2-201ENST00000436514 498 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 MTND2P3-201ENST00000452458 470 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AL139099.1-201ENST00000497398 403 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 HMGB1P47-201ENST00000511281 589 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC087369.1-201ENST00000520775 996 ntBASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.65□□□□□ -1.67
SHROOM1Q2M3G4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms