Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AC006994.1-201ENST00000438212 839 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 RN7SL807P-201ENST00000470923 297 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 CDC27P2-201ENST00000425026 1922 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 BDP1P-201ENST00000582658 1990 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 RPL23AP57-201ENST00000332361 466 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 MIR93-201ENST00000385024 80 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 U3.26-201ENST00000391236 204 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 UBA52P3-201ENST00000491303 382 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AC138409.2-202ENST00000507274 458 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AC026422.1-201ENST00000623961 452 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.47□□□□□ -1.69
CACNA1SQ13698 AL596275.2-204ENST00000641628 552 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 AL596275.2-206ENST00000641957 626 ntBASIC4.47□□□□□ -1.69
CACNA1SQ13698 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.46□□□□□ -1.69
CACNA1SQ13698 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CACNA1SQ13698 AL353743.1-202ENST00000431724 1695 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC010655.1-201ENST00000449336 292 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 RPL5P24-201ENST00000463742 885 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC025445.1-201ENST00000502728 300 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CACNA1SQ13698 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 AL035425.3-201ENST00000564206 4996 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 AC068254.2-201ENST00000623938 3577 ntBASIC4.46□□□□□ -1.7
CACNA1SQ13698 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CACNA1SQ13698 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CACNA1SQ13698 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CACNA1SQ13698 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 OR10J6P-201ENST00000289731 930 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 FTH1P25-201ENST00000447665 469 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 HMGB3P22-202ENST00000451823 572 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 RPS26P15-201ENST00000488067 348 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 AGGF1P3-201ENST00000493675 1213 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 RNU6-1334P-201ENST00000516032 105 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AL133383.2-201ENST00000622958 2336 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 BTBD10P1-201ENST00000549824 1352 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 ATP5HP2-201ENST00000433885 485 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AL390334.1-201ENST00000556395 450 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 OR5AC4P-202ENST00000642086 985 ntBASIC4.45□□□□□ -1.7
CACNA1SQ13698 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CACNA1SQ13698 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CACNA1SQ13698 AL365440.1-201ENST00000436135 2167 ntBASIC4.44□□□□□ -1.7
CACNA1SQ13698 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.44□□□□□ -1.7
CACNA1SQ13698 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CACNA1SQ13698 RNA5SP374-201ENST00000362939 125 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms