Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL590704.1-201ENST00000402856 794 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3□□□□□ -1.93
HIST1H1AQ02539 NAP1L1P2-201ENST00000414182 1089 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 PRELID3BP11-201ENST00000414230 479 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC048351.1-201ENST00000420064 602 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC023141.6-201ENST00000429418 337 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC073143.1-201ENST00000436316 395 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 CYCSP43-201ENST00000438233 310 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 CYCSP42-201ENST00000450823 238 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 RPL12P26-201ENST00000452430 487 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3□□□□□ -1.93
HIST1H1AQ02539 RN7SL860P-201ENST00000473738 223 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC105137.1-201ENST00000484355 562 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC078817.1-201ENST00000492623 435 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC004069.2-201ENST00000505438 1114 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC025674.1-201ENST00000507074 324 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC023141.12-201ENST00000512399 199 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3□□□□□ -1.93
HIST1H1AQ02539 MTND1P6-201ENST00000523621 946 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3□□□□□ -1.93
HIST1H1AQ02539 AL450489.1-201ENST00000612071 468 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AL139089.1-201ENST00000620372 975 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 MIR8059-201ENST00000620427 81 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AP003400.2-201ENST00000624036 666 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3□□□□□ -1.93
HIST1H1AQ02539 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HIST1H1AQ02539 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 AC006504.1-201ENST00000562493 3666 ntBASIC3□□□□□ -1.93
HIST1H1AQ02539 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HIST1H1AQ02539 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HIST1H1AQ02539 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AL592293.2-201ENST00000422292 996 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 CHIAP3-201ENST00000423668 1133 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC009965.2-201ENST00000425328 970 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 SETP5-201ENST00000437270 562 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 HMGB1P37-201ENST00000439613 609 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 CEACAMP9-201ENST00000442990 513 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 EIF2S2P2-201ENST00000447161 982 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC010468.1-201ENST00000461022 817 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 RPS23P1-201ENST00000491662 432 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 RPS27AP13-201ENST00000498403 237 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 IGBP1P5-201ENST00000507524 1000 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC108471.1-201ENST00000513977 287 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC011477.5-201ENST00000586571 259 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC011492.1-201ENST00000600023 315 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC015849.6-201ENST00000605454 474 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC006946.3-201ENST00000609791 756 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 RMST_8.1-201ENST00000610287 165 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC099778.2-201ENST00000610904 211 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC010608.2-201ENST00000624830 470 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 AC092326.2-201ENST00000624772 1561 ntBASIC2.99□□□□□ -1.93
HIST1H1AQ02539 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HIST1H1AQ02539 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 DCAF13P1-201ENST00000495256 1330 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 RAD1P1-201ENST00000231383 813 ntBASIC2.98□□□□□ -1.93
HIST1H1AQ02539 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HIST1H1AQ02539 HLFP1-201ENST00000402375 499 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms