Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCL20P78556 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.9□□□□□ -1.94
CCL20P78556 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CCL20P78556 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCL20P78556 RNU6-666P-201ENST00000363499 107 ntBASIC2.9□□□□□ -1.95
CCL20P78556 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCL20P78556 RNA5SP87-201ENST00000384155 118 ntBASIC2.9□□□□□ -1.95
CCL20P78556 HMGB3P18-201ENST00000406327 590 ntBASIC2.9□□□□□ -1.95
CCL20P78556 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC2.9□□□□□ -1.95
CCL20P78556 HMGB3P20-201ENST00000417997 600 ntBASIC2.9□□□□□ -1.95
CCL20P78556 GLRXP1-201ENST00000423261 334 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AP000907.1-201ENST00000428428 510 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.9□□□□□ -1.95
CCL20P78556 RPS29P17-201ENST00000430795 166 ntBASIC2.9□□□□□ -1.95
CCL20P78556 USP9YP7-201ENST00000436723 430 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.9□□□□□ -1.95
CCL20P78556 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCL20P78556 RPL31P20-201ENST00000449593 360 ntBASIC2.9□□□□□ -1.95
CCL20P78556 USP9YP32-201ENST00000452432 430 ntBASIC2.9□□□□□ -1.95
CCL20P78556 ANP32BP2-201ENST00000454525 545 ntBASIC2.9□□□□□ -1.95
CCL20P78556 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.9□□□□□ -1.95
CCL20P78556 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.9□□□□□ -1.95
CCL20P78556 SNORD108-201ENST00000459332 71 ntBASIC2.9□□□□□ -1.95
CCL20P78556 RPL21P11-201ENST00000461458 483 ntBASIC2.9□□□□□ -1.95
CCL20P78556 RPL23AP44-201ENST00000482216 473 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.9□□□□□ -1.95
CCL20P78556 AL132838.2-201ENST00000492041 314 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AC106872.4-201ENST00000510050 523 ntBASIC2.9□□□□□ -1.95
CCL20P78556 CCNHP1-201ENST00000513311 678 ntBASIC2.9□□□□□ -1.95
CCL20P78556 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.9□□□□□ -1.95
CCL20P78556 Vault.1-201ENST00000516474 102 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.9□□□□□ -1.95
CCL20P78556 AC008083.2-201ENST00000546707 476 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AL389895.1-201ENST00000554127 252 ntBASIC2.9□□□□□ -1.95
CCL20P78556 OR4U1P-201ENST00000554958 912 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AC006960.3-201ENST00000561845 705 ntBASIC2.9□□□□□ -1.95
CCL20P78556 SS18L2P2-201ENST00000583960 235 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.9□□□□□ -1.95
CCL20P78556 RPL12P25-202ENST00000598100 674 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.9□□□□□ -1.95
CCL20P78556 BNIP3P38-201ENST00000601117 544 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AP003117.1-201ENST00000602771 554 ntBASIC2.9□□□□□ -1.95
CCL20P78556 SNORA62.6-201ENST00000606322 83 ntBASIC2.9□□□□□ -1.95
CCL20P78556 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.9□□□□□ -1.95
CCL20P78556 AL355816.1-201ENST00000607951 118 ntBASIC2.9□□□□□ -1.95
CCL20P78556 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.9□□□□□ -1.95
CCL20P78556 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CCL20P78556 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCL20P78556 AC068647.1-201ENST00000489539 2265 ntBASIC2.9□□□□□ -1.95
CCL20P78556 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CCL20P78556 AC007656.2-201ENST00000624902 4547 ntBASIC2.9□□□□□ -1.95
CCL20P78556 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCL20P78556 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCL20P78556 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCL20P78556 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCL20P78556 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCL20P78556 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 RN7SKP15-201ENST00000364742 309 ntBASIC2.89□□□□□ -1.95
CCL20P78556 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 SKINT1L-201ENST00000401057 817 ntBASIC2.89□□□□□ -1.95
CCL20P78556 MRM2-202ENST00000407040 582 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 RNA5SP293-201ENST00000410527 113 ntBASIC2.89□□□□□ -1.95
CCL20P78556 RNA5SP31-201ENST00000411144 127 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.89□□□□□ -1.95
CCL20P78556 TPT1P2-201ENST00000413105 503 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 MTND4P11-201ENST00000417020 1058 ntBASIC2.89□□□□□ -1.95
CCL20P78556 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.89□□□□□ -1.95
CCL20P78556 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 BTF3P10-201ENST00000433415 495 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC125238.1-201ENST00000448842 249 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC006480.1-201ENST00000449887 378 ntBASIC2.89□□□□□ -1.95
CCL20P78556 RPL12P26-201ENST00000452430 487 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 AL049830.2-201ENST00000480072 201 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 OR5H4P-201ENST00000510851 923 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.89□□□□□ -1.95
CCL20P78556 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 IGKV3D-34-201ENST00000522638 302 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.89□□□□□ -1.95
CCL20P78556 BRD9P1-201ENST00000529855 560 ntBASIC2.89□□□□□ -1.95
CCL20P78556 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCL20P78556 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.89□□□□□ -1.95
CCL20P78556 AC068831.4-201ENST00000556118 109 ntBASIC2.89□□□□□ -1.95
CCL20P78556 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 AC012146.2-201ENST00000576545 416 ntBASIC2.89□□□□□ -1.95
CCL20P78556 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.89□□□□□ -1.95
CCL20P78556 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.89□□□□□ -1.95
CCL20P78556 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms