Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SPCS3P61009 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 AL353746.1-201ENST00000566293 6881 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SPCS3P61009 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SPCS3P61009 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 SNORD35B-201ENST00000363660 87 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 HMGN2P8-201ENST00000391458 268 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.28□□□□□ -1.88
SPCS3P61009 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.28□□□□□ -1.88
SPCS3P61009 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.28□□□□□ -1.88
SPCS3P61009 KCTD9P3-201ENST00000434597 1169 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.28□□□□□ -1.88
SPCS3P61009 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.28□□□□□ -1.88
SPCS3P61009 AL157884.3-201ENST00000448273 1184 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AC073264.2-201ENST00000448886 166 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 MTCO3P20-201ENST00000454926 688 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 RPL23AP12-201ENST00000467573 473 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.28□□□□□ -1.88
SPCS3P61009 AC117394.1-201ENST00000477323 567 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AC105233.1-201ENST00000498840 781 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 HPRT1P2-201ENST00000505250 544 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.28□□□□□ -1.88
SPCS3P61009 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.28□□□□□ -1.88
SPCS3P61009 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.28□□□□□ -1.88
SPCS3P61009 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.28□□□□□ -1.88
SPCS3P61009 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AC022655.2-201ENST00000577280 318 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 AL365503.1-201ENST00000605247 905 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 AC091953.3-201ENST00000623220 236 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 AC092184.1-201ENST00000625042 715 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SPCS3P61009 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 FAM91A3P-201ENST00000456826 2544 ntBASIC3.28□□□□□ -1.88
SPCS3P61009 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SPCS3P61009 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SPCS3P61009 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SPCS3P61009 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.89
SPCS3P61009 RNF6P1-201ENST00000444889 1784 ntBASIC3.28□□□□□ -1.89
SPCS3P61009 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.28□□□□□ -1.89
SPCS3P61009 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPCS3P61009 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.27□□□□□ -1.89
SPCS3P61009 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
SPCS3P61009 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SPCS3P61009 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPCS3P61009 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.27□□□□□ -1.89
SPCS3P61009 SNORA60-201ENST00000362396 134 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SPCS3P61009 AL035419.1-201ENST00000397037 564 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.27□□□□□ -1.89
SPCS3P61009 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.27□□□□□ -1.89
SPCS3P61009 SNORA71B-202ENST00000439232 272 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RPL12P3-201ENST00000440080 396 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.27□□□□□ -1.89
SPCS3P61009 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.27□□□□□ -1.89
SPCS3P61009 MTND2P28-201ENST00000457540 1044 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RNA5SP246-201ENST00000458909 119 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 U3.44-201ENST00000458938 192 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RNU7-27P-201ENST00000459281 62 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RPL7P1-201ENST00000468161 747 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RPL7P9-201ENST00000468715 747 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.27□□□□□ -1.89
SPCS3P61009 AF213884.1-201ENST00000488102 463 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RN7SL691P-201ENST00000494487 301 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AC093824.1-201ENST00000508796 343 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.27□□□□□ -1.89
SPCS3P61009 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SPCS3P61009 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.27□□□□□ -1.89
SPCS3P61009 TRAV37-201ENST00000553906 342 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.27□□□□□ -1.89
SPCS3P61009 OR4U1P-201ENST00000554958 912 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AC106785.3-201ENST00000564064 847 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AC022968.1-201ENST00000567372 442 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.27□□□□□ -1.89
SPCS3P61009 NF1P5-201ENST00000588287 448 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RPL12P25-202ENST00000598100 674 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.27□□□□□ -1.89
SPCS3P61009 AL355816.1-201ENST00000607951 118 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AC211433.2-201ENST00000608433 387 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.27□□□□□ -1.89
SPCS3P61009 AL591424.2-201ENST00000617023 128 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 RPL23AP61-201ENST00000623642 466 ntBASIC3.27□□□□□ -1.89
SPCS3P61009 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SPCS3P61009 AC116667.1-201ENST00000604855 2072 ntBASIC3.26□□□□□ -1.89
SPCS3P61009 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SPCS3P61009 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SPCS3P61009 OR4A15-201ENST00000314706 1035 ntBASIC3.26□□□□□ -1.89
SPCS3P61009 AC079741.1-201ENST00000321498 212 ntBASIC3.26□□□□□ -1.89
SPCS3P61009 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SPCS3P61009 MIR550A3-201ENST00000390735 95 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms