Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 RLIMP1-201ENST00000339626 1680 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 ERCC6-202ENST00000374127 1782 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN18P56856 GTF2H2B-203ENST00000508065 1432 ntBASIC3.7□□□□□ -1.82
CLDN18P56856 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN18P56856 AP000357.1-201ENST00000409926 1165 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN18P56856 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN18P56856 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 AL117339.2-201ENST00000430475 180 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 MTCO1P57-201ENST00000432182 261 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN18P56856 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 HMGB1P5-202ENST00000451497 985 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 RAD23BP3-201ENST00000454157 1152 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 RPL36AP13-201ENST00000457490 317 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLDN18P56856 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN18P56856 RNU6-889P-201ENST00000517189 103 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 IGLV3-26-201ENST00000520756 302 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN18P56856 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN18P56856 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN18P56856 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN18P56856 AC069240.1-201ENST00000548774 375 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN18P56856 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN18P56856 MTND6P33-201ENST00000571794 183 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 AP000919.1-202ENST00000581139 1264 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 MIR5684-201ENST00000585074 65 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 VN1R79P-201ENST00000593540 513 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 LLPHP1-201ENST00000603571 367 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 AC064801.1-201ENST00000612025 407 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 AC024941.1-201ENST00000612250 334 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 AL713922.2-201ENST00000619384 716 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 AL669942.2-201ENST00000620352 697 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 MIR7154-201ENST00000620673 73 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 MIR7702-201ENST00000621931 59 ntBASIC3.69□□□□□ -1.82
CLDN18P56856 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN18P56856 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLDN18P56856 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLDN18P56856 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN18P56856 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLDN18P56856 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CLDN18P56856 XIAPP3-201ENST00000312918 795 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 RNA5SP283-201ENST00000365604 119 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 MIR153-1-201ENST00000384914 90 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN18P56856 MIR1183-201ENST00000408856 89 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN18P56856 HSPE1P12-201ENST00000412576 301 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN18P56856 RPL31P45-201ENST00000419532 356 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 AC093698.1-201ENST00000423843 571 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN18P56856 AL162151.2-201ENST00000448875 158 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 RPS26P28-201ENST00000470806 348 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN18P56856 KRT19P6-201ENST00000510983 209 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN18P56856 HMGB1P46-201ENST00000520062 610 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN18P56856 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN18P56856 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN18P56856 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN18P56856 BNIP3P5-201ENST00000562290 498 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN18P56856 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN18P56856 CASC19-261ENST00000641853 1638 ntBASIC3.68□□□□□ -1.82
CLDN18P56856 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLDN18P56856 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLDN18P56856 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN18P56856 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLDN18P56856 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN18P56856 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN18P56856 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN18P56856 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CLDN18P56856 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN18P56856 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLDN18P56856 Z82217.1-201ENST00000625157 8149 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN18P56856 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN18P56856 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms