Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 ANKRD36P1-201ENST00000344424 659 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 RNVU1-6-201ENST00000364688 164 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 RNU6-549P-201ENST00000384433 107 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 MIR921-201ENST00000401133 56 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 TAF13P2-201ENST00000416876 286 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC234782.4-201ENST00000417646 1048 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC092648.1-201ENST00000425870 423 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 DYNLL1P7-201ENST00000429273 258 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 GTF2IP3-201ENST00000433887 494 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AL359265.2-201ENST00000434367 631 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 AL121877.1-201ENST00000453704 622 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 ISCUP1-201ENST00000454451 448 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC244505.3-201ENST00000454598 187 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC006967.1-201ENST00000467608 589 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC010683.1-201ENST00000473673 378 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC104763.1-201ENST00000475274 360 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AL161747.1-201ENST00000480068 358 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC112673.1-201ENST00000513168 575 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 RN7SKP287-201ENST00000516546 266 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC090281.1-201ENST00000523019 276 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 MTND4LP24-201ENST00000572277 291 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 MIR4716-201ENST00000579628 84 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 MIR4270-201ENST00000581799 70 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 NF1P5-201ENST00000588287 448 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AL357094.1-201ENST00000603845 844 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC009159.2-201ENST00000617603 606 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.8□□□□□ -1.64
HDAC4P56524 AL121594.5-201ENST00000631724 573 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 AL353743.4-201ENST00000422653 1547 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 MFSD8-220ENST00000641243 1422 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 ZNF137P-201ENST00000456718 1920 ntBASIC4.8□□□□□ -1.64
HDAC4P56524 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 MTCO1P6-201ENST00000481192 1384 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
HDAC4P56524 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 AL355578.1-201ENST00000607405 1328 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC021146.4-201ENST00000309229 279 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 SNORA62-201ENST00000365493 153 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 RNU6-906P-201ENST00000384700 70 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 MIR525-201ENST00000384978 85 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 Y_RNA.578-201ENST00000390903 88 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 MIR298-201ENST00000401212 88 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AL049697.2-201ENST00000403708 294 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 RN7SKP106-201ENST00000410832 272 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC4P56524 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 MTND4P3-201ENST00000417829 541 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC4P56524 C4BPAP2-201ENST00000428434 478 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC009263.1-201ENST00000441193 1239 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 ARL4AP3-201ENST00000441452 574 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 RPL37P3-201ENST00000456825 293 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 SNORD11.1-201ENST00000459482 85 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 RNU7-140P-201ENST00000459546 60 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC010469.1-201ENST00000463864 576 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 OR52A4P-201ENST00000472867 958 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC020898.1-201ENST00000474167 787 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 PRELID3BP7-201ENST00000503606 469 ntBASIC4.79□□□□□ -1.64
HDAC4P56524 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.79□□□□□ -1.64
HDAC4P56524 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC4P56524 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.79□□□□□ -1.64
HDAC4P56524 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC4P56524 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC4P56524 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.79□□□□□ -1.64
HDAC4P56524 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HDAC4P56524 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.79□□□□□ -1.64
HDAC4P56524 PCNAP1-202ENST00000595299 752 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms