Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 Y_RNA.187-201ENST00000363918 113 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 RNA5SP232-201ENST00000364144 119 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHA4P54764 Y_RNA.414-201ENST00000384011 101 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 RNU6-907P-201ENST00000390924 102 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 RPL21P50-201ENST00000417698 477 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHA4P54764 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 ARL2BPP10-201ENST00000446487 531 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHA4P54764 RNU7-182P-201ENST00000459009 62 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 AC017037.1-201ENST00000508460 471 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 AC083906.1-201ENST00000509298 406 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 AL133399.1-201ENST00000527476 298 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 AC011477.5-201ENST00000586571 259 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.32□□□□□ -1.4
EPHA4P54764 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHA4P54764 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHA4P54764 AL354718.1-201ENST00000619764 589 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHA4P54764 AC000123.2-201ENST00000623124 461 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 AL159972.1-201ENST00000625150 448 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.32□□□□□ -1.4
EPHA4P54764 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.32□□□□□ -1.4
EPHA4P54764 AC111152.1-202ENST00000635848 339 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.32□□□□□ -1.4
EPHA4P54764 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
EPHA4P54764 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 RBPJP2-201ENST00000618187 1444 ntBASIC6.32□□□□□ -1.4
EPHA4P54764 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
EPHA4P54764 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.32□□□□□ -1.4
EPHA4P54764 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EPHA4P54764 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 LCOR-201ENST00000286067 4542 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC062029.1-202ENST00000606164 3651 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
EPHA4P54764 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 RNA5SP77-201ENST00000365394 120 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 MIR1275-201ENST00000408770 80 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHA4P54764 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 TIMM9P1-201ENST00000436122 256 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC012075.1-201ENST00000436549 580 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 RPL7P52-201ENST00000449200 742 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 RPL21P6-201ENST00000479171 504 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 AC024558.1-201ENST00000505008 528 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHA4P54764 AC093303.1-201ENST00000514549 295 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 RNU6-864P-201ENST00000516256 108 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 RNA5SP92-201ENST00000516437 110 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC022634.1-201ENST00000520765 532 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHA4P54764 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHA4P54764 PCNAP4-201ENST00000532690 730 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHA4P54764 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.31□□□□□ -1.4
EPHA4P54764 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHA4P54764 AC245389.1-201ENST00000605141 529 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC011373.1-201ENST00000607270 237 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC007546.1-201ENST00000619452 559 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 MIR6811-201ENST00000620409 58 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC073593.1-201ENST00000624500 411 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC119674.1-207ENST00000641355 633 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.31□□□□□ -1.4
EPHA4P54764 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
EPHA4P54764 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.31□□□□□ -1.4
EPHA4P54764 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
EPHA4P54764 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms