Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HOXA1P49639 SIAH1P1-201ENST00000479411 923 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 RN7SL547P-201ENST00000490793 290 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC092045.1-201ENST00000495716 1231 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.04□□□□□ -1.76
HOXA1P49639 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 AL356057.1-201ENST00000533798 831 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA1P49639 AC068714.1-201ENST00000559623 800 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 CYCSP40-201ENST00000575927 294 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 BPTFP1-201ENST00000579209 492 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 AC069307.1-201ENST00000602820 447 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 NTAN1P1-201ENST00000603150 646 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AL031281.1-201ENST00000604049 488 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC104695.2-201ENST00000605056 775 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AL451064.1-201ENST00000607718 471 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC015982.1-201ENST00000608113 465 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC131235.4-201ENST00000609288 620 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA1P49639 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 AL359715.5-201ENST00000623431 443 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC016717.3-201ENST00000624730 554 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AC116563.2-201ENST00000624751 535 ntBASIC4.04□□□□□ -1.76
HOXA1P49639 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA1P49639 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
HOXA1P49639 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXA1P49639 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA1P49639 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXA1P49639 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA1P49639 AP000526.1-201ENST00000603308 1388 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC025263.3-201ENST00000622965 1396 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXA1P49639 RN7SKP15-201ENST00000364742 309 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA1P49639 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 SNORA70.10-201ENST00000384515 134 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 RNU4-72P-201ENST00000410754 173 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 RN7SKP216-201ENST00000411050 312 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 OR51A3P-201ENST00000413596 924 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA1P49639 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA1P49639 P2RY10P2-201ENST00000416730 913 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 RPL7P44-201ENST00000424827 742 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC093655.2-201ENST00000425735 631 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC073069.1-201ENST00000428657 441 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 UBE2V1P1-201ENST00000430836 445 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AL365396.1-201ENST00000430854 671 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 AL445567.1-201ENST00000439121 144 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 AL691482.1-201ENST00000453255 87 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 RPL21P134-201ENST00000453468 483 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 ANKRD26P4-201ENST00000455755 950 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 RPL7P51-201ENST00000490532 749 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 RN7SL466P-201ENST00000497546 295 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC104090.1-201ENST00000506341 1171 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXA1P49639 PPBPP1-201ENST00000510807 373 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 MTATP6P1-201ENST00000514057 681 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 RNU6-759P-201ENST00000516740 103 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 CYCSP28-201ENST00000534284 321 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC005868.1-201ENST00000536421 331 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXA1P49639 AC004217.3-201ENST00000551552 878 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 CBX3P5-201ENST00000552017 521 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC116553.2-201ENST00000564203 463 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA1P49639 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 AL390816.3-201ENST00000604527 1066 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC090948.2-201ENST00000607363 564 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA1P49639 uc_338.32-201ENST00000615087 172 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC023509.5-201ENST00000617434 807 ntBASIC4.03□□□□□ -1.76
HOXA1P49639 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA1P49639 AC116618.1-201ENST00000634617 774 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms