Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 ELOCP30-201ENST00000447108 299 ntBASIC4.44□□□□□ -1.7
SOX2P48431 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 RPL36AP33-201ENST00000450395 310 ntBASIC4.44□□□□□ -1.7
SOX2P48431 OR6C5P-201ENST00000452388 923 ntBASIC4.44□□□□□ -1.7
SOX2P48431 KATNBL1P6-201ENST00000453433 915 ntBASIC4.44□□□□□ -1.7
SOX2P48431 ZNF114P1-201ENST00000453500 292 ntBASIC4.44□□□□□ -1.7
SOX2P48431 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 RPS15AP1-201ENST00000457423 391 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 GYG1P1-201ENST00000460864 698 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC100832.1-201ENST00000471945 383 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC109486.1-201ENST00000486833 374 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC073073.1-201ENST00000493920 463 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 RNU6-513P-201ENST00000516104 104 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC027308.1-201ENST00000517993 110 ntBASIC4.44□□□□□ -1.7
SOX2P48431 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
SOX2P48431 AC005363.1-201ENST00000530779 351 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AP000873.5-201ENST00000533906 236 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC005868.1-201ENST00000536421 331 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 AC107958.1-201ENST00000556576 290 ntBASIC4.44□□□□□ -1.7
SOX2P48431 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 AC008687.2-201ENST00000597865 520 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC027243.2-201ENST00000602530 724 ntBASIC4.44□□□□□ -1.7
SOX2P48431 FO393422.1-201ENST00000603908 708 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AL499605.1-201ENST00000604628 403 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AL139286.2-201ENST00000606838 396 ntBASIC4.44□□□□□ -1.7
SOX2P48431 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 MIR7844-201ENST00000616161 122 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.44□□□□□ -1.7
SOX2P48431 AC015871.5-202ENST00000623252 701 ntBASIC4.44□□□□□ -1.7
SOX2P48431 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.44□□□□□ -1.7
SOX2P48431 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 AC135068.12-201ENST00000637370 931 ntBASIC4.44□□□□□ -1.7
SOX2P48431 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 OR55B1P-203ENST00000641518 2602 ntBASIC4.44□□□□□ -1.7
SOX2P48431 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX2P48431 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX2P48431 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX2P48431 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX2P48431 USP9YP4-201ENST00000424401 1745 ntBASIC4.43□□□□□ -1.7
SOX2P48431 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.43□□□□□ -1.7
SOX2P48431 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SOX2P48431 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SOX2P48431 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 RNU6-216P-201ENST00000363282 104 ntBASIC4.43□□□□□ -1.7
SOX2P48431 U3.4-201ENST00000363352 213 ntBASIC4.43□□□□□ -1.7
SOX2P48431 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 RNU6-192P-201ENST00000391253 100 ntBASIC4.43□□□□□ -1.7
SOX2P48431 MTCO3P31-201ENST00000405526 789 ntBASIC4.43□□□□□ -1.7
SOX2P48431 NCSTNP1-201ENST00000406229 144 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.43□□□□□ -1.7
SOX2P48431 AP000534.2-201ENST00000412729 568 ntBASIC4.43□□□□□ -1.7
SOX2P48431 RBMY2KP-201ENST00000418221 992 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AL133325.1-201ENST00000421090 382 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC009237.2-201ENST00000421358 284 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC006366.1-201ENST00000422002 759 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 NPM1P24-201ENST00000428039 894 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AL389925.1-201ENST00000432257 728 ntBASIC4.43□□□□□ -1.7
SOX2P48431 RPL37P1-201ENST00000432310 284 ntBASIC4.43□□□□□ -1.7
SOX2P48431 RPL34P6-201ENST00000432390 345 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 B3GNT2P1-201ENST00000434960 952 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.43□□□□□ -1.7
SOX2P48431 MTND2P20-201ENST00000440805 661 ntBASIC4.43□□□□□ -1.7
SOX2P48431 PCNPP2-201ENST00000441651 455 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 RNU6-956P-201ENST00000458868 103 ntBASIC4.43□□□□□ -1.7
SOX2P48431 RN7SL443P-201ENST00000464331 290 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms