Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 HMGB3P18-201ENST00000406327 590 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 SNORA11F-201ENST00000408237 128 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 RNU2-65P-201ENST00000410162 185 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC004022.2-201ENST00000413824 193 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 HMGB3P5-201ENST00000428894 612 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A12P48065 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A12P48065 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC6A12P48065 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 NDUFA12P1-201ENST00000455914 406 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AL139824.2-201ENST00000458731 1095 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 RN7SL481P-201ENST00000477764 299 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AK3P4-201ENST00000504283 583 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 SNORA19.3-201ENST00000516165 130 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AC008562.1-201ENST00000521763 330 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AC068831.4-201ENST00000556118 109 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AP000919.1-202ENST00000581139 1264 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 MIR5096-201ENST00000583713 70 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AL022067.1-201ENST00000602426 454 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AP002802.2-201ENST00000605877 235 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AL353600.1-201ENST00000608148 251 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AL021997.2-201ENST00000615674 271 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 uc_338.13-201ENST00000618243 179 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC6A12P48065 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AL356863.1-201ENST00000623378 1080 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 AC097655.1-201ENST00000635075 318 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 MIR6715B-201ENST00000637172 77 ntBASIC4.21□□□□□ -1.74
SLC6A12P48065 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC6A12P48065 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A12P48065 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A12P48065 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A12P48065 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC6A12P48065 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SLC6A12P48065 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
SLC6A12P48065 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC6A12P48065 AC015813.6-201ENST00000624409 5808 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SLC6A12P48065 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A12P48065 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 AL139811.1-201ENST00000424779 2299 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SLC6A12P48065 MIR331-201ENST00000362302 94 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 RNU6-984P-201ENST00000363236 109 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC6A12P48065 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC6A12P48065 AC016397.1-201ENST00000412463 242 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 HMGB3P31-201ENST00000413333 595 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A12P48065 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A12P48065 PTP4A1P7-201ENST00000423476 514 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC6A12P48065 DNAJC19P7-201ENST00000428811 344 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 PRELID3BP10-201ENST00000431957 584 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC6A12P48065 ARF4P4-201ENST00000439608 520 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 RPS7P5-201ENST00000441482 581 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC6A12P48065 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC6A12P48065 AC104164.2-201ENST00000496953 495 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AC008427.1-201ENST00000503102 655 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 MTATP6P22-201ENST00000507369 598 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 HPRT1P1-201ENST00000509498 657 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC6A12P48065 NDUFB4P12-201ENST00000513465 390 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC6A12P48065 RAB9BP1-201ENST00000519581 626 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC6A12P48065 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC6A12P48065 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC6A12P48065 AL121834.1-201ENST00000572284 509 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 MIR4458-201ENST00000578872 75 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SLC6A12P48065 AC008745.1-201ENST00000604064 271 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AL354984.3-201ENST00000604803 325 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 OR2BH1P-201ENST00000608850 864 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 AC245100.7-201ENST00000609678 442 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 RNU6-1192P-201ENST00000612197 107 ntBASIC4.2□□□□□ -1.74
SLC6A12P48065 RNU6-489P-201ENST00000618289 107 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms