Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SLC25A36P1-201ENST00000590111 465 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AC234771.5-201ENST00000600161 514 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AC011458.1-201ENST00000604034 617 ntBASIC4.66□□□□□ -1.66
HADHAP40939 AC105227.2-201ENST00000615075 605 ntBASIC4.66□□□□□ -1.66
HADHAP40939 RN7SL722P-201ENST00000617780 284 ntBASIC4.66□□□□□ -1.66
HADHAP40939 RN7SL565P-201ENST00000618246 284 ntBASIC4.66□□□□□ -1.66
HADHAP40939 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
HADHAP40939 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HADHAP40939 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
HADHAP40939 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
HADHAP40939 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.65□□□□□ -1.66
HADHAP40939 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HADHAP40939 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HADHAP40939 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
HADHAP40939 DBF4P1-201ENST00000412976 1892 ntBASIC4.65□□□□□ -1.66
HADHAP40939 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HADHAP40939 RNU6-619P-201ENST00000365146 108 ntBASIC4.65□□□□□ -1.67
HADHAP40939 SNORA56-201ENST00000383966 129 ntBASIC4.65□□□□□ -1.67
HADHAP40939 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 FAR2P2-201ENST00000413041 594 ntBASIC4.65□□□□□ -1.67
HADHAP40939 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HADHAP40939 RPL26P29-201ENST00000415623 438 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HADHAP40939 FAR2P4-202ENST00000425399 584 ntBASIC4.65□□□□□ -1.67
HADHAP40939 RPL21P91-201ENST00000429231 479 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.65□□□□□ -1.67
HADHAP40939 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 TPT1P13-201ENST00000449760 499 ntBASIC4.65□□□□□ -1.67
HADHAP40939 RPL23AP15-201ENST00000450202 459 ntBASIC4.65□□□□□ -1.67
HADHAP40939 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.65□□□□□ -1.67
HADHAP40939 RPL7AP28-201ENST00000464513 571 ntBASIC4.65□□□□□ -1.67
HADHAP40939 RN7SL738P-201ENST00000470264 297 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AC006463.2-201ENST00000473326 348 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 AC104763.1-201ENST00000475274 360 ntBASIC4.65□□□□□ -1.67
HADHAP40939 RPL36AP41-201ENST00000493820 306 ntBASIC4.65□□□□□ -1.67
HADHAP40939 CEACAMP10-202ENST00000495431 496 ntBASIC4.65□□□□□ -1.67
HADHAP40939 CAB39P1-201ENST00000502277 460 ntBASIC4.65□□□□□ -1.67
HADHAP40939 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.65□□□□□ -1.67
HADHAP40939 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 STMN1P2-201ENST00000508435 439 ntBASIC4.65□□□□□ -1.67
HADHAP40939 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 OR5H4P-201ENST00000510851 923 ntBASIC4.65□□□□□ -1.67
HADHAP40939 RNA5SP446-201ENST00000515955 82 ntBASIC4.65□□□□□ -1.67
HADHAP40939 RNU6-276P-201ENST00000516114 96 ntBASIC4.65□□□□□ -1.67
HADHAP40939 snoZ278.1-201ENST00000517059 112 ntBASIC4.65□□□□□ -1.67
HADHAP40939 SOD1P3-201ENST00000518682 454 ntBASIC4.65□□□□□ -1.67
HADHAP40939 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.65□□□□□ -1.67
HADHAP40939 AC004217.3-201ENST00000551552 878 ntBASIC4.65□□□□□ -1.67
HADHAP40939 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.65□□□□□ -1.67
HADHAP40939 AC069431.2-201ENST00000604149 1099 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AP000255.1-201ENST00000610276 676 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AL359535.1-201ENST00000612100 1087 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AL158196.1-201ENST00000616786 434 ntBASIC4.65□□□□□ -1.67
HADHAP40939 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 AC009452.1-201ENST00000640823 606 ntBASIC4.65□□□□□ -1.67
HADHAP40939 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HADHAP40939 ZNF137P-201ENST00000456718 1920 ntBASIC4.65□□□□□ -1.67
HADHAP40939 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HADHAP40939 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.65□□□□□ -1.67
HADHAP40939 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HADHAP40939 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.65□□□□□ -1.67
HADHAP40939 AC125257.1-201ENST00000560400 2930 ntBASIC4.65□□□□□ -1.67
HADHAP40939 AC111188.2-201ENST00000529697 1387 ntBASIC4.65□□□□□ -1.67
HADHAP40939 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HADHAP40939 AC135352.1-201ENST00000506173 1418 ntBASIC4.64□□□□□ -1.67
HADHAP40939 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HADHAP40939 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.64□□□□□ -1.67
HADHAP40939 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HADHAP40939 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.64□□□□□ -1.67
HADHAP40939 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HADHAP40939 AC079741.1-201ENST00000321498 212 ntBASIC4.64□□□□□ -1.67
HADHAP40939 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HADHAP40939 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HADHAP40939 RNA5SP391-201ENST00000363456 119 ntBASIC4.64□□□□□ -1.67
HADHAP40939 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HADHAP40939 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HADHAP40939 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
HADHAP40939 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.64□□□□□ -1.67
HADHAP40939 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.64□□□□□ -1.67
HADHAP40939 AC027644.1-201ENST00000419595 298 ntBASIC4.64□□□□□ -1.67
HADHAP40939 PAICSP7-201ENST00000419829 962 ntBASIC4.64□□□□□ -1.67
HADHAP40939 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.64□□□□□ -1.67
HADHAP40939 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.64□□□□□ -1.67
HADHAP40939 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms