Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VARSP26640 AC011504.1-201ENST00000623331 4103 ntBASIC6.75□□□□□ -1.33
VARSP26640 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VARSP26640 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VARSP26640 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VARSP26640 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 Y_RNA.389-201ENST00000383924 113 ntBASIC6.74□□□□□ -1.33
VARSP26640 RNU6-890P-201ENST00000384121 107 ntBASIC6.74□□□□□ -1.33
VARSP26640 RN7SKP148-201ENST00000410179 275 ntBASIC6.74□□□□□ -1.33
VARSP26640 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 RPL24P2-201ENST00000421023 475 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC012065.2-201ENST00000421295 375 ntBASIC6.74□□□□□ -1.33
VARSP26640 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.74□□□□□ -1.33
VARSP26640 AL161722.2-201ENST00000434731 981 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC064862.5-201ENST00000440618 334 ntBASIC6.74□□□□□ -1.33
VARSP26640 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.74□□□□□ -1.33
VARSP26640 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 GSTA11P-201ENST00000452866 669 ntBASIC6.74□□□□□ -1.33
VARSP26640 RN7SL149P-201ENST00000465197 281 ntBASIC6.74□□□□□ -1.33
VARSP26640 RPL12P20-201ENST00000475538 479 ntBASIC6.74□□□□□ -1.33
VARSP26640 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 RPS4XP14-201ENST00000493072 781 ntBASIC6.74□□□□□ -1.33
VARSP26640 RPL22P13-201ENST00000493291 347 ntBASIC6.74□□□□□ -1.33
VARSP26640 RPL19P11-201ENST00000495944 589 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.74□□□□□ -1.33
VARSP26640 AC097473.1-201ENST00000508142 408 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 Y_RNA.721-201ENST00000517207 102 ntBASIC6.74□□□□□ -1.33
VARSP26640 IGKV2-36-201ENST00000519999 223 ntBASIC6.74□□□□□ -1.33
VARSP26640 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 TRIM51DP-201ENST00000529746 596 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 AL109628.1-201ENST00000556877 366 ntBASIC6.74□□□□□ -1.33
VARSP26640 HMGN2P47-201ENST00000559378 272 ntBASIC6.74□□□□□ -1.33
VARSP26640 RPL21P12-201ENST00000559810 515 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.74□□□□□ -1.33
VARSP26640 SNORA70D-201ENST00000578836 135 ntBASIC6.74□□□□□ -1.33
VARSP26640 MIR3672-201ENST00000584290 82 ntBASIC6.74□□□□□ -1.33
VARSP26640 AC087575.1-201ENST00000585087 229 ntBASIC6.74□□□□□ -1.33
VARSP26640 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VARSP26640 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.74□□□□□ -1.33
VARSP26640 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.74□□□□□ -1.33
VARSP26640 AC009779.8-202ENST00000607990 932 ntBASIC6.74□□□□□ -1.33
VARSP26640 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
VARSP26640 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.74□□□□□ -1.33
VARSP26640 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.74□□□□□ -1.33
VARSP26640 AC096921.2-201ENST00000561507 1916 ntBASIC6.74□□□□□ -1.33
VARSP26640 CLCA3P-203ENST00000490028 2781 ntBASIC6.74□□□□□ -1.33
VARSP26640 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.74□□□□□ -1.33
VARSP26640 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VARSP26640 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.73□□□□□ -1.33
VARSP26640 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.73□□□□□ -1.33
VARSP26640 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
VARSP26640 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
VARSP26640 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.73□□□□□ -1.33
VARSP26640 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 Y_RNA.167-201ENST00000363735 109 ntBASIC6.73□□□□□ -1.33
VARSP26640 SNORA62.1-201ENST00000364287 154 ntBASIC6.73□□□□□ -1.33
VARSP26640 Y_RNA.396-201ENST00000383949 103 ntBASIC6.73□□□□□ -1.33
VARSP26640 RNU6-317P-201ENST00000384031 107 ntBASIC6.73□□□□□ -1.33
VARSP26640 RNU6-39P-201ENST00000384344 107 ntBASIC6.73□□□□□ -1.33
VARSP26640 Y_RNA.645-201ENST00000391229 102 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SKP271-201ENST00000410528 320 ntBASIC6.73□□□□□ -1.33
VARSP26640 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
VARSP26640 RPL36AP36-201ENST00000418616 301 ntBASIC6.73□□□□□ -1.33
VARSP26640 SDAD1P3-201ENST00000427380 333 ntBASIC6.73□□□□□ -1.33
VARSP26640 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.73□□□□□ -1.33
VARSP26640 RNU7-180P-201ENST00000459240 63 ntBASIC6.73□□□□□ -1.33
VARSP26640 AC092324.1-201ENST00000468671 324 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SL502P-201ENST00000481857 290 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SL868P-201ENST00000485915 303 ntBASIC6.73□□□□□ -1.33
VARSP26640 PRMT5P1-201ENST00000514351 598 ntBASIC6.73□□□□□ -1.33
VARSP26640 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SKP70-201ENST00000516655 271 ntBASIC6.73□□□□□ -1.33
VARSP26640 RNU6-256P-201ENST00000516747 97 ntBASIC6.73□□□□□ -1.33
VARSP26640 RN7SKP99-201ENST00000517028 307 ntBASIC6.73□□□□□ -1.33
VARSP26640 EEF1B2P2-201ENST00000519625 676 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms