Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH3P22223 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
CDH3P22223 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH3P22223 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH3P22223 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CDH3P22223 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
CDH3P22223 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 XIAPP3-201ENST00000312918 795 ntBASIC4.36□□□□□ -1.71
CDH3P22223 MIR659-201ENST00000384963 97 ntBASIC4.36□□□□□ -1.71
CDH3P22223 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
CDH3P22223 U3.22-201ENST00000391120 215 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AP000357.1-201ENST00000409926 1165 ntBASIC4.36□□□□□ -1.71
CDH3P22223 ELOCP19-201ENST00000411919 318 ntBASIC4.36□□□□□ -1.71
CDH3P22223 UBE2V1P9-201ENST00000414760 368 ntBASIC4.36□□□□□ -1.71
CDH3P22223 COX6CP17-201ENST00000421389 185 ntBASIC4.36□□□□□ -1.71
CDH3P22223 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH3P22223 FTH1P16-201ENST00000435241 552 ntBASIC4.36□□□□□ -1.71
CDH3P22223 FABP5P3-201ENST00000437960 408 ntBASIC4.36□□□□□ -1.71
CDH3P22223 RPL23AP12-201ENST00000467573 473 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC018635.1-201ENST00000468292 1030 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC023050.1-201ENST00000498198 304 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH3P22223 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 IGLVIV-53-201ENST00000520107 367 ntBASIC4.36□□□□□ -1.71
CDH3P22223 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH3P22223 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDH3P22223 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH3P22223 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 MIR4789-201ENST00000577469 82 ntBASIC4.36□□□□□ -1.71
CDH3P22223 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH3P22223 ZNF92P3-201ENST00000596594 954 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 AC091057.3-201ENST00000602684 733 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC115286.1-201ENST00000604298 434 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH3P22223 AC055764.2-201ENST00000610089 670 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC012409.3-201ENST00000611343 981 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH3P22223 AC022960.3-201ENST00000619794 441 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AP003485.1-201ENST00000625093 753 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH3P22223 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH3P22223 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH3P22223 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH3P22223 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH3P22223 MTCO1P14-201ENST00000441695 1559 ntBASIC4.36□□□□□ -1.71
CDH3P22223 AC125257.1-201ENST00000560400 2930 ntBASIC4.35□□□□□ -1.71
CDH3P22223 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH3P22223 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 AL356387.2-201ENST00000422272 243 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC115285.1-201ENST00000424879 736 ntBASIC4.35□□□□□ -1.71
CDH3P22223 RPL21P43-201ENST00000425440 472 ntBASIC4.35□□□□□ -1.71
CDH3P22223 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 AP001324.1-201ENST00000428553 399 ntBASIC4.35□□□□□ -1.71
CDH3P22223 RPL7P29-201ENST00000437151 728 ntBASIC4.35□□□□□ -1.71
CDH3P22223 ARF4P4-201ENST00000439608 520 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AL645638.1-201ENST00000440519 361 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH3P22223 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AC092905.1-201ENST00000467527 949 ntBASIC4.35□□□□□ -1.71
CDH3P22223 RN7SL860P-201ENST00000473738 223 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AP000926.1-201ENST00000479573 241 ntBASIC4.35□□□□□ -1.71
CDH3P22223 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH3P22223 SUMO2P5-201ENST00000506790 245 ntBASIC4.35□□□□□ -1.71
CDH3P22223 TPT1P8-201ENST00000510120 555 ntBASIC4.35□□□□□ -1.71
CDH3P22223 HNRNPKP5-201ENST00000515300 253 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AP002812.4-201ENST00000532139 286 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC007424.1-203ENST00000554613 687 ntBASIC4.35□□□□□ -1.71
CDH3P22223 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH3P22223 AC010735.1-201ENST00000567305 1026 ntBASIC4.35□□□□□ -1.71
CDH3P22223 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AC011477.5-201ENST00000586571 259 ntBASIC4.35□□□□□ -1.71
CDH3P22223 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AC096947.1-201ENST00000603233 470 ntBASIC4.35□□□□□ -1.71
CDH3P22223 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH3P22223 AC018754.1-201ENST00000607486 925 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms