Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010608.2-201ENST00000624830 470 ntBASIC4.09□□□□□ -1.75
XRCC1P18887 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.09□□□□□ -1.75
XRCC1P18887 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
XRCC1P18887 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
XRCC1P18887 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
XRCC1P18887 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
XRCC1P18887 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
XRCC1P18887 AL049555.1-201ENST00000562834 1933 ntBASIC4.09□□□□□ -1.76
XRCC1P18887 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
XRCC1P18887 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.08□□□□□ -1.76
XRCC1P18887 MIR1193-201ENST00000408109 78 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC013404.1-201ENST00000413068 249 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC018797.3-201ENST00000513388 1241 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 OR8K2P-201ENST00000524645 927 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.08□□□□□ -1.76
XRCC1P18887 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 BNIP3P5-201ENST00000562290 498 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC018552.3-201ENST00000567416 561 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
XRCC1P18887 VN1R84P-201ENST00000593697 235 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 AC067959.1-201ENST00000604334 379 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC090525.3-201ENST00000605601 189 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 HMGB1P50-201ENST00000605814 607 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 MIR6867-201ENST00000610636 67 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AC078899.5-201ENST00000612475 178 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 AP006248.2-201ENST00000623309 592 ntBASIC4.08□□□□□ -1.76
XRCC1P18887 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
XRCC1P18887 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
XRCC1P18887 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
XRCC1P18887 AL118496.1-201ENST00000440201 1812 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.07□□□□□ -1.76
XRCC1P18887 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 RNA5SP515-201ENST00000364570 118 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 RNA5SP479-201ENST00000364858 117 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.07□□□□□ -1.76
XRCC1P18887 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 SNORA57.1-201ENST00000391227 145 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AL353692.2-201ENST00000407054 335 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 RNU2-17P-201ENST00000410290 190 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AL391219.1-201ENST00000422570 483 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 VDAC1P6-201ENST00000430062 855 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AL035458.1-201ENST00000433096 585 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.07□□□□□ -1.76
XRCC1P18887 IFNWP4-201ENST00000453148 294 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 RPL5P32-201ENST00000454085 879 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.07□□□□□ -1.76
XRCC1P18887 COL6A4P2-205ENST00000509855 506 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
XRCC1P18887 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.07□□□□□ -1.76
XRCC1P18887 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.07□□□□□ -1.76
XRCC1P18887 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
XRCC1P18887 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.07□□□□□ -1.76
XRCC1P18887 AC007599.1-201ENST00000568688 1174 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.07□□□□□ -1.76
XRCC1P18887 AC017076.1-201ENST00000607613 578 ntBASIC4.07□□□□□ -1.76
XRCC1P18887 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.07□□□□□ -1.76
XRCC1P18887 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
XRCC1P18887 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.07□□□□□ -1.76
XRCC1P18887 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
XRCC1P18887 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
XRCC1P18887 AC134882.1-201ENST00000603738 1676 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
XRCC1P18887 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 SNORA62.2-201ENST00000364672 152 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.06□□□□□ -1.76
XRCC1P18887 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
XRCC1P18887 AC011742.1-201ENST00000431448 434 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms