Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFRAP16234 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 AL136964.1-201ENST00000622038 2990 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC090229.1-201ENST00000590983 1609 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AC012020.1-201ENST00000624541 1728 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 RNU1-94P-201ENST00000362627 173 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RNU6-1339P-201ENST00000363574 91 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RNA5SP28-201ENST00000363841 119 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 RNU6-354P-201ENST00000383862 107 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RNU6-610P-201ENST00000384264 107 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL049693.1-201ENST00000402760 611 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL161631.1-201ENST00000417933 486 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 GTF2IP2-201ENST00000424290 697 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 PRELID3BP10-201ENST00000431957 584 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AC009263.1-201ENST00000441193 1239 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL512326.1-201ENST00000443050 721 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AL096803.2-201ENST00000450032 677 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 GTF2IP12-201ENST00000456547 356 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC079804.1-201ENST00000461922 436 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RPL7AP28-201ENST00000464513 571 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RN7SL385P-201ENST00000468873 276 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 RPS26P28-201ENST00000470806 348 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 TPT1P3-201ENST00000492841 512 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 FTH1P24-201ENST00000503502 462 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AC016550.1-201ENST00000505348 785 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC006064.5-201ENST00000541782 248 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AL109766.1-201ENST00000555080 552 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.5□□□□□ -1.69
PDGFRAP16234 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 MIR4697-201ENST00000582977 78 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 ABI1P1-201ENST00000603375 1120 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 ARF4P1-201ENST00000605447 541 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 AC005962.2-201ENST00000611427 652 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 MIR6830-201ENST00000636015 70 ntBASIC4.5□□□□□ -1.69
PDGFRAP16234 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.5□□□□□ -1.69
PDGFRAP16234 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDGFRAP16234 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.5□□□□□ -1.69
PDGFRAP16234 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFRAP16234 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PDGFRAP16234 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PDGFRAP16234 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PDGFRAP16234 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC068538.1-201ENST00000376856 336 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFRAP16234 RNA5SP239-201ENST00000410218 129 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 NRBF2P2-201ENST00000413087 861 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFRAP16234 MTND2P15-201ENST00000418575 892 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFRAP16234 RPL30P3-201ENST00000424262 333 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AL157831.1-201ENST00000426134 473 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.49□□□□□ -1.69
PDGFRAP16234 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC092170.1-201ENST00000440211 356 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 RPL23AP81-201ENST00000455252 467 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC104629.1-201ENST00000494226 508 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFRAP16234 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDGFRAP16234 GLRXP2-201ENST00000555594 321 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 PSMB7P1-201ENST00000556349 514 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AL121834.1-201ENST00000572284 509 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC011477.5-201ENST00000586571 259 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC006338.2-201ENST00000616864 791 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC253576.2-201ENST00000618815 580 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 MIR7154-201ENST00000620673 73 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 AL590396.2-201ENST00000636511 1041 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 OR52H1-202ENST00000641796 1061 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 1313 ms