Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC131902.3-201ENST00000611767 581 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC129778.1-202ENST00000623812 261 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A2P12110 AC093591.3-201ENST00000634516 308 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AL591379.1-207ENST00000635982 261 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.48□□□□□ -1.53
COL6A2P12110 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COL6A2P12110 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.48□□□□□ -1.53
COL6A2P12110 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A2P12110 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
COL6A2P12110 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.47□□□□□ -1.53
COL6A2P12110 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 CR848007.1-201ENST00000442354 1699 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL6A2P12110 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL6A2P12110 U3.7-201ENST00000363668 216 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 RNA5SP122-201ENST00000384457 108 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 CIR1P3-201ENST00000405137 479 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AL390316.1-201ENST00000406279 553 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AL512422.1-201ENST00000407033 553 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 RPS3AP24-201ENST00000407896 734 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 RN7SKP240-201ENST00000410583 375 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC234782.4-201ENST00000417646 1048 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.47□□□□□ -1.53
COL6A2P12110 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC006335.2-201ENST00000437993 330 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AL121601.2-201ENST00000438019 707 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 ACTR3P2-201ENST00000439585 1257 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 ELOCP10-201ENST00000440624 327 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AL671855.1-201ENST00000446875 1203 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC005229.2-201ENST00000456995 399 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 NDUFA5P5-201ENST00000468361 342 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC025458.1-201ENST00000506046 166 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 MTND5P4-201ENST00000514978 288 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 RNU6-488P-201ENST00000515918 99 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.47□□□□□ -1.53
COL6A2P12110 DPPA2P4-201ENST00000563717 878 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC141257.3-201ENST00000572906 215 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 SLC25A36P1-201ENST00000590111 465 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
COL6A2P12110 VN1R79P-201ENST00000593540 513 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 BNIP3P8-201ENST00000597863 560 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 AC104785.1-201ENST00000603220 588 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC233280.2-201ENST00000603917 1070 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 PRELID3BP8-201ENST00000604148 295 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 ELOCP34-201ENST00000604436 327 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC012409.3-201ENST00000611343 981 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC025574.2-201ENST00000615621 514 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 RN7SL544P-201ENST00000617232 284 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 RN7SL763P-201ENST00000620922 284 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AP001005.3-201ENST00000622049 129 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AC138649.3-201ENST00000622154 254 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.47□□□□□ -1.53
COL6A2P12110 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL6A2P12110 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.47□□□□□ -1.53
COL6A2P12110 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 AC026523.2-201ENST00000625039 7739 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 AL022311.1-201ENST00000623726 19416 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms