Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
KRT3P12035 AC006249.1-201ENST00000621223 471 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AP005264.7-201ENST00000625003 745 ntBASIC4.37□□□□□ -1.71
KRT3P12035 MIR3653-201ENST00000625572 110 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AL590396.2-201ENST00000636511 1041 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC093311.1-201ENST00000506586 2021 ntBASIC4.37□□□□□ -1.71
KRT3P12035 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT3P12035 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
KRT3P12035 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
KRT3P12035 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
KRT3P12035 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT3P12035 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT3P12035 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT3P12035 USP9YP4-201ENST00000424401 1745 ntBASIC4.36□□□□□ -1.71
KRT3P12035 MIR383-201ENST00000362257 73 ntBASIC4.36□□□□□ -1.71
KRT3P12035 RHOT1P2-201ENST00000366423 333 ntBASIC4.36□□□□□ -1.71
KRT3P12035 RNU6-481P-201ENST00000384194 107 ntBASIC4.36□□□□□ -1.71
KRT3P12035 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AP000357.1-201ENST00000409926 1165 ntBASIC4.36□□□□□ -1.71
KRT3P12035 VTA1P1-201ENST00000414044 866 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AL158050.1-201ENST00000416077 457 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT3P12035 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT3P12035 AC008173.1-201ENST00000418901 264 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT3P12035 BTF3P10-201ENST00000433415 495 ntBASIC4.36□□□□□ -1.71
KRT3P12035 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT3P12035 AC073143.1-201ENST00000436316 395 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AL353748.1-201ENST00000440753 474 ntBASIC4.36□□□□□ -1.71
KRT3P12035 RPL6P5-201ENST00000445678 828 ntBASIC4.36□□□□□ -1.71
KRT3P12035 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT3P12035 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT3P12035 RNA5SP246-201ENST00000458909 119 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC006511.1-201ENST00000470614 315 ntBASIC4.36□□□□□ -1.71
KRT3P12035 UQCRHP4-201ENST00000471686 272 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC092902.1-201ENST00000486999 259 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT3P12035 AC093824.1-201ENST00000508796 343 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
KRT3P12035 RAB9BP1-201ENST00000519581 626 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT3P12035 OR5AK3P-201ENST00000527486 1297 ntBASIC4.36□□□□□ -1.71
KRT3P12035 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.36□□□□□ -1.71
KRT3P12035 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT3P12035 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.36□□□□□ -1.71
KRT3P12035 AL139395.1-201ENST00000603662 160 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC079610.2-201ENST00000604818 690 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC010857.1-201ENST00000606398 594 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC078899.5-201ENST00000612475 178 ntBASIC4.36□□□□□ -1.71
KRT3P12035 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
KRT3P12035 AP002371.2-201ENST00000624450 503 ntBASIC4.36□□□□□ -1.71
KRT3P12035 AC009452.1-201ENST00000640823 606 ntBASIC4.36□□□□□ -1.71
KRT3P12035 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT3P12035 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.36□□□□□ -1.71
KRT3P12035 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.36□□□□□ -1.71
KRT3P12035 AC022893.2-201ENST00000564832 3296 ntBASIC4.36□□□□□ -1.71
KRT3P12035 Z82217.1-201ENST00000625157 8149 ntBASIC4.36□□□□□ -1.71
KRT3P12035 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRT3P12035 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 ERCC6-202ENST00000374127 1782 ntBASIC4.35□□□□□ -1.71
KRT3P12035 RNF6P1-201ENST00000444889 1784 ntBASIC4.35□□□□□ -1.71
KRT3P12035 AC009951.1-201ENST00000623674 2614 ntBASIC4.35□□□□□ -1.71
KRT3P12035 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 SNORA37-201ENST00000384504 129 ntBASIC4.35□□□□□ -1.71
KRT3P12035 MIR1303-201ENST00000408625 86 ntBASIC4.35□□□□□ -1.71
KRT3P12035 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 AC069282.1-201ENST00000411911 526 ntBASIC4.35□□□□□ -1.71
KRT3P12035 RAC1P3-201ENST00000416129 580 ntBASIC4.35□□□□□ -1.71
KRT3P12035 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.35□□□□□ -1.71
KRT3P12035 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 RPL36AP13-201ENST00000457490 317 ntBASIC4.35□□□□□ -1.71
KRT3P12035 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 C1GALT1P3-201ENST00000522049 819 ntBASIC4.35□□□□□ -1.71
KRT3P12035 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.35□□□□□ -1.71
KRT3P12035 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT3P12035 MIR3138-201ENST00000585238 82 ntBASIC4.35□□□□□ -1.71
KRT3P12035 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRT3P12035 U6.48-201ENST00000618523 106 ntBASIC4.35□□□□□ -1.71
KRT3P12035 AC116563.2-201ENST00000624751 535 ntBASIC4.35□□□□□ -1.71
KRT3P12035 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT3P12035 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
KRT3P12035 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.35□□□□□ -1.71
KRT3P12035 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT3P12035 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT3P12035 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT3P12035 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 PNPT1P2-201ENST00000456768 2050 ntBASIC4.34□□□□□ -1.71
KRT3P12035 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRT3P12035 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms