Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MFSD8-233ENST00000641482 4860 ntBASIC4.25□□□□□ -1.73
COL4A1P02462 RNU1-70P-201ENST00000362618 164 ntBASIC4.25□□□□□ -1.73
COL4A1P02462 MTND4P22-201ENST00000413116 1169 ntBASIC4.25□□□□□ -1.73
COL4A1P02462 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A1P02462 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.25□□□□□ -1.73
COL4A1P02462 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A1P02462 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.25□□□□□ -1.73
COL4A1P02462 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.25□□□□□ -1.73
COL4A1P02462 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.25□□□□□ -1.73
COL4A1P02462 IGHV3-63-201ENST00000518422 341 ntBASIC4.25□□□□□ -1.73
COL4A1P02462 CKS1BP3-201ENST00000600888 237 ntBASIC4.25□□□□□ -1.73
COL4A1P02462 AC022149.2-201ENST00000621061 203 ntBASIC4.25□□□□□ -1.73
COL4A1P02462 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL4A1P02462 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A1P02462 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.25□□□□□ -1.73
COL4A1P02462 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL4A1P02462 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL4A1P02462 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A1P02462 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A1P02462 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A1P02462 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A1P02462 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.24□□□□□ -1.73
COL4A1P02462 KATNBL1P2-201ENST00000433311 835 ntBASIC4.24□□□□□ -1.73
COL4A1P02462 ATP5HP2-201ENST00000433885 485 ntBASIC4.24□□□□□ -1.73
COL4A1P02462 NPM1P17-201ENST00000479221 602 ntBASIC4.24□□□□□ -1.73
COL4A1P02462 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A1P02462 PTGES3P3-201ENST00000511479 482 ntBASIC4.24□□□□□ -1.73
COL4A1P02462 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.24□□□□□ -1.73
COL4A1P02462 AC092868.3-201ENST00000560515 784 ntBASIC4.24□□□□□ -1.73
COL4A1P02462 AC009464.1-201ENST00000615731 469 ntBASIC4.24□□□□□ -1.73
COL4A1P02462 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A1P02462 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A1P02462 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.24□□□□□ -1.73
COL4A1P02462 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.24□□□□□ -1.73
COL4A1P02462 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL4A1P02462 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL4A1P02462 SNORA48.5-201ENST00000391143 135 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A1P02462 RPS20P1-201ENST00000434853 354 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AC104849.1-201ENST00000462623 405 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AC073522.1-201ENST00000483312 377 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A1P02462 IGHV3-32-201ENST00000519182 355 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A1P02462 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A1P02462 MIR5680-201ENST00000577577 84 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 MIR5004-201ENST00000579078 107 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.23□□□□□ -1.73
COL4A1P02462 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.23□□□□□ -1.73
COL4A1P02462 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AC100793.4-201ENST00000613683 429 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 AP003355.3-201ENST00000623465 114 ntBASIC4.23□□□□□ -1.73
COL4A1P02462 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A1P02462 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A1P02462 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A1P02462 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A1P02462 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COL4A1P02462 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.23□□□□□ -1.73
COL4A1P02462 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL4A1P02462 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A1P02462 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.23□□□□□ -1.73
COL4A1P02462 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL4A1P02462 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
COL4A1P02462 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A1P02462 NPM1P48-201ENST00000436002 853 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AF228730.2-201ENST00000438784 848 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A1P02462 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A1P02462 AC092747.2-201ENST00000545069 983 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A1P02462 OR6C71P-202ENST00000641886 1107 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
COL4A1P02462 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A1P02462 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
COL4A1P02462 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 RNU6-283P-201ENST00000364788 107 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.22□□□□□ -1.73
COL4A1P02462 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A1P02462 IFNNP1-201ENST00000429219 553 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AC021678.1-201ENST00000505195 936 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AC005798.1-201ENST00000513715 387 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.22□□□□□ -1.73
COL4A1P02462 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 AC005858.4-201ENST00000623191 700 ntBASIC4.22□□□□□ -1.73
COL4A1P02462 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL4A1P02462 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A1P02462 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
COL4A1P02462 AF117829.1-206ENST00000621883 3802 ntBASIC4.21□□□□□ -1.74
COL4A1P02462 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A1P02462 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A1P02462 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A1P02462 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A1P02462 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A1P02462 RN7SKP111-201ENST00000410349 271 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms