Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC011374.2-201ENST00000607135 526 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AL161616.1-201ENST00000611867 286 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AL391261.4-201ENST00000616012 481 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 U6.48-201ENST00000618523 106 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 MIR6730-201ENST00000622213 67 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 SNORA58B-201ENST00000364259 136 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL133270.1-201ENST00000402635 279 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL590290.1-201ENST00000405336 380 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 MIR1251-201ENST00000408552 70 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 RN7SKP285-201ENST00000410137 318 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 RN7SKP177-201ENST00000410567 355 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AP001324.1-201ENST00000428553 399 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 ELOCP11-201ENST00000436690 332 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 SKP1P1-201ENST00000438081 489 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 ELOCP16-201ENST00000444494 332 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 NANOGP10-201ENST00000453325 895 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC004801.2-202ENST00000463559 283 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 RPL23AP14-201ENST00000468281 468 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 RPL12P20-201ENST00000475538 479 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC011005.3-201ENST00000491624 395 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC092045.1-201ENST00000495716 1231 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC068305.1-201ENST00000497406 726 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC020593.1-201ENST00000507399 299 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC095050.2-201ENST00000510748 1458 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC084757.1-201ENST00000559987 490 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC007448.1-201ENST00000582714 234 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC093765.1-201ENST00000603758 881 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 KATNBL1P5-201ENST00000605015 517 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AC006946.3-201ENST00000609791 756 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 CFTRP2-201ENST00000634304 199 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 ATE1-AS1-202ENST00000636460 506 ntBASIC3.06□□□□□ -1.92
HLA-DQA1P01909 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
HLA-DQA1P01909 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC022893.2-201ENST00000564832 3296 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 AC106871.1-201ENST00000568324 3102 ntBASIC3.05□□□□□ -1.92
HLA-DQA1P01909 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms