Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 COX6B1P6-201ENST00000522347 255 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 MIR4697-201ENST00000582977 78 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC114878.2-201ENST00000604863 1251 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 MIR6867-201ENST00000610636 67 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 AL162233.1-201ENST00000620014 944 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 AC095038.2-201ENST00000621464 1070 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRBV12-3P01733 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 OR11H5P-202ENST00000641612 1325 ntBASIC3.16□□□□□ -1.9
TRBV12-3P01733 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV12-3P01733 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRBV12-3P01733 NOL8P1-201ENST00000508336 3529 ntBASIC3.15□□□□□ -1.9
TRBV12-3P01733 MARK2P15-201ENST00000432204 2186 ntBASIC3.15□□□□□ -1.9
TRBV12-3P01733 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.15□□□□□ -1.9
TRBV12-3P01733 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRBV12-3P01733 HSPA8P19-201ENST00000505359 1517 ntBASIC3.15□□□□□ -1.9
TRBV12-3P01733 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRBV12-3P01733 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 ZNF90P1-201ENST00000480493 1951 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV12-3P01733 RNA5SP388-201ENST00000362584 119 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RNA5SP391-201ENST00000363456 119 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RNA5SP513-201ENST00000364648 118 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC136624.1-201ENST00000400791 413 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AL603766.1-201ENST00000407763 664 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RNU2-65P-201ENST00000410162 185 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC108032.1-201ENST00000416706 207 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AL356095.1-201ENST00000417217 199 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 OR5BE1P-201ENST00000425977 939 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 NIPA2P1-201ENST00000426223 976 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 NPM1P34-201ENST00000428821 893 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 ELOCP6-201ENST00000429066 328 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 FTH1P6-201ENST00000430768 320 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 OR4C10P-201ENST00000434991 931 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 MTCYBP21-201ENST00000443300 1113 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC092685.1-201ENST00000447960 1243 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 ELOCP12-201ENST00000458706 328 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RPL38P1-201ENST00000460914 211 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RPS7P7-201ENST00000463499 571 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 RN7SL585P-201ENST00000470538 280 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 MTCO1P35-201ENST00000515270 228 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC004923.2-201ENST00000529649 369 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 PTP4A1P6-201ENST00000531034 478 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC090751.1-201ENST00000566966 267 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC007599.1-201ENST00000568688 1174 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC079171.1-201ENST00000568788 914 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC018618.2-201ENST00000604770 446 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 KATNBL1P1-201ENST00000605192 748 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC011374.2-201ENST00000607135 526 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AL355802.4-201ENST00000607635 548 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC025016.1-201ENST00000616746 682 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AC008785.1-201ENST00000624475 456 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 OR5BE1P-202ENST00000641168 1176 ntBASIC3.15□□□□□ -1.91
TRBV12-3P01733 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV12-3P01733 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV12-3P01733 RLIMP1-201ENST00000339626 1680 ntBASIC3.14□□□□□ -1.91
TRBV12-3P01733 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms