Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 SNORD9-201ENST00000362566 104 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 U3.39-201ENST00000408569 239 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC098592.2-201ENST00000413158 265 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 RPL7P2-201ENST00000427639 268 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC099063.2-201ENST00000446360 662 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 NDUFB4P12-201ENST00000513465 390 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 RANP9-201ENST00000519957 271 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 VN1R81P-201ENST00000602085 372 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 AC115621.1-201ENST00000604653 858 ntBASIC4.17□□□□□ -1.74
CTDNEP1O95476 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CTDNEP1O95476 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.17□□□□□ -1.74
CTDNEP1O95476 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC068647.1-201ENST00000489539 2265 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 SNORA57.1-201ENST00000391227 145 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 RN7SKP53-201ENST00000411337 315 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 NIPA2P1-201ENST00000426223 976 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC006989.1-201ENST00000427212 131 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 RAB9AP5-201ENST00000437794 597 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 RAB9AP2-201ENST00000443911 597 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 MTND6P32-201ENST00000457611 483 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 CCDC75P1-201ENST00000469247 791 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC007688.1-201ENST00000475592 759 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 PCBP2P3-201ENST00000509726 843 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 VWA8P1-201ENST00000510889 176 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AL135786.2-201ENST00000608422 615 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC027290.2-201ENST00000623210 18662 ntBASIC4.16□□□□□ -1.74
CTDNEP1O95476 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.16□□□□□ -1.74
CTDNEP1O95476 AC074029.4-201ENST00000624796 1859 ntBASIC4.15□□□□□ -1.74
CTDNEP1O95476 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CTDNEP1O95476 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.15□□□□□ -1.74
CTDNEP1O95476 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CTDNEP1O95476 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTDNEP1O95476 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTDNEP1O95476 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTDNEP1O95476 RNU6-984P-201ENST00000363236 109 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 OR13C3-201ENST00000374781 1108 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 RPL5P19-201ENST00000404228 893 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 SNORA57.3-201ENST00000411095 141 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 ATP5A1P2-201ENST00000412323 255 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 SYF2P2-201ENST00000417620 583 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTDNEP1O95476 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 OSTCP5-201ENST00000425293 453 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 AP000936.3-201ENST00000438127 255 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 PPIAP17-201ENST00000438507 471 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC010655.1-201ENST00000449336 292 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 MRPS31P2-201ENST00000451581 518 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CTDNEP1O95476 RN7SL132P-201ENST00000478131 296 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC026333.2-201ENST00000542164 106 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC106785.1-201ENST00000565935 262 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 AC067852.3-201ENST00000589177 561 ntBASIC4.15□□□□□ -1.75
CTDNEP1O95476 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.15□□□□□ -1.75
CTDNEP1O95476 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms