Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 AC021876.1-201ENST00000425959 359 ntBASIC1.6□□□□□ -2.15
USH2AO75445 RPS26P4-201ENST00000431743 355 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 TPTE2P3-201ENST00000441562 1189 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC1.6□□□□□ -2.15
USH2AO75445 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.6□□□□□ -2.15
USH2AO75445 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 AC118273.1-201ENST00000525324 3006 ntBASIC1.6□□□□□ -2.15
USH2AO75445 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 AC007685.1-201ENST00000329806 452 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AL080315.1-201ENST00000406055 466 ntBASIC1.6□□□□□ -2.15
USH2AO75445 TRGV5P-201ENST00000419915 354 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AC083863.1-201ENST00000438811 231 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 AL135938.1-201ENST00000443141 297 ntBASIC1.6□□□□□ -2.15
USH2AO75445 VN1R32P-201ENST00000452234 905 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.6□□□□□ -2.15
USH2AO75445 IGKV3-31-201ENST00000523109 329 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
USH2AO75445 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.59□□□□□ -2.15
USH2AO75445 AC022417.1-201ENST00000624768 1303 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AC079777.1-201ENST00000623836 1953 ntBASIC1.59□□□□□ -2.15
USH2AO75445 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC1.59□□□□□ -2.15
USH2AO75445 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 FAM133CP-201ENST00000332869 704 ntBASIC1.59□□□□□ -2.15
USH2AO75445 VTA1P1-201ENST00000414044 866 ntBASIC1.59□□□□□ -2.15
USH2AO75445 TOMM20P4-201ENST00000427861 435 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AL357552.1-201ENST00000445254 415 ntBASIC1.59□□□□□ -2.15
USH2AO75445 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.59□□□□□ -2.15
USH2AO75445 AC005229.2-201ENST00000456995 399 ntBASIC1.59□□□□□ -2.15
USH2AO75445 snoU13.15-201ENST00000459407 104 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.59□□□□□ -2.15
USH2AO75445 SUMO2P19-201ENST00000518920 295 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AC005476.1-201ENST00000554427 397 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AC006349.1-201ENST00000555526 235 ntBASIC1.59□□□□□ -2.15
USH2AO75445 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.59□□□□□ -2.15
USH2AO75445 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC1.59□□□□□ -2.15
USH2AO75445 AC067852.3-201ENST00000589177 561 ntBASIC1.59□□□□□ -2.15
USH2AO75445 IMMP1LP1-201ENST00000605170 488 ntBASIC1.59□□□□□ -2.15
USH2AO75445 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC1.59□□□□□ -2.15
USH2AO75445 AC063923.1-201ENST00000478982 1619 ntBASIC1.59□□□□□ -2.15
USH2AO75445 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
USH2AO75445 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
USH2AO75445 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 AC093829.1-201ENST00000506662 1618 ntBASIC1.59□□□□□ -2.15
USH2AO75445 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 AL136116.1-201ENST00000403591 381 ntBASIC1.59□□□□□ -2.15
USH2AO75445 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC1.59□□□□□ -2.15
USH2AO75445 AC109925.1-201ENST00000478069 331 ntBASIC1.59□□□□□ -2.15
USH2AO75445 CKS1BP2-201ENST00000497342 240 ntBASIC1.59□□□□□ -2.15
USH2AO75445 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC1.59□□□□□ -2.15
USH2AO75445 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 RN7SKP132-201ENST00000516001 208 ntBASIC1.59□□□□□ -2.15
USH2AO75445 PHBP17-201ENST00000528576 541 ntBASIC1.59□□□□□ -2.15
USH2AO75445 HMGB2P1-201ENST00000591146 634 ntBASIC1.59□□□□□ -2.15
USH2AO75445 SMCR2_2.1-201ENST00000619783 161 ntBASIC1.59□□□□□ -2.15
USH2AO75445 AL596275.2-208ENST00000641192 594 ntBASIC1.59□□□□□ -2.15
USH2AO75445 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.59□□□□□ -2.15
USH2AO75445 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
USH2AO75445 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC1.59□□□□□ -2.15
USH2AO75445 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 RPS3AP26-201ENST00000398259 784 ntBASIC1.59□□□□□ -2.16
USH2AO75445 HSD52-202ENST00000436225 772 ntTSL 3 BASIC1.59□□□□□ -2.16
USH2AO75445 AC000041.1-201ENST00000439655 175 ntBASIC1.59□□□□□ -2.16
USH2AO75445 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 AC010468.1-201ENST00000461022 817 ntBASIC1.59□□□□□ -2.16
USH2AO75445 RN7SL499P-201ENST00000481141 276 ntBASIC1.59□□□□□ -2.16
USH2AO75445 AADACP1-206ENST00000561502 1193 ntBASIC1.59□□□□□ -2.16
USH2AO75445 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC1.59□□□□□ -2.16
USH2AO75445 RNVU1-4-201ENST00000612985 164 ntBASIC1.59□□□□□ -2.16
USH2AO75445 U4.6-201ENST00000621618 127 ntBASIC1.59□□□□□ -2.16
USH2AO75445 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
USH2AO75445 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
USH2AO75445 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
USH2AO75445 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms