Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 OR1L1-202ENST00000373686 1083 ntBASIC4.29□□□□□ -1.72
TO15178 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TO15178 MIR16-1-201ENST00000385271 89 ntBASIC4.29□□□□□ -1.72
TO15178 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TO15178 RNA5SP397-201ENST00000391323 118 ntBASIC4.29□□□□□ -1.72
TO15178 SDHCP2-201ENST00000398565 501 ntBASIC4.29□□□□□ -1.72
TO15178 AC092648.1-201ENST00000425870 423 ntBASIC4.29□□□□□ -1.72
TO15178 FABP7P2-201ENST00000429946 379 ntBASIC4.29□□□□□ -1.72
TO15178 FTH1P6-201ENST00000430768 320 ntBASIC4.29□□□□□ -1.72
TO15178 RPS6P12-201ENST00000432491 726 ntBASIC4.29□□□□□ -1.72
TO15178 MTND2P5-201ENST00000432656 1006 ntBASIC4.29□□□□□ -1.72
TO15178 AL035246.1-201ENST00000433554 1255 ntBASIC4.29□□□□□ -1.72
TO15178 TDGF1P1-201ENST00000445734 527 ntBASIC4.29□□□□□ -1.72
TO15178 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.29□□□□□ -1.72
TO15178 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.29□□□□□ -1.72
TO15178 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
TO15178 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.29□□□□□ -1.72
TO15178 PRDX3P4-201ENST00000470828 747 ntBASIC4.29□□□□□ -1.72
TO15178 AC104689.1-201ENST00000473356 768 ntBASIC4.29□□□□□ -1.72
TO15178 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TO15178 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
TO15178 FTH1P24-201ENST00000503502 462 ntBASIC4.29□□□□□ -1.72
TO15178 STMN1P2-201ENST00000508435 439 ntBASIC4.29□□□□□ -1.72
TO15178 AC008885.2-201ENST00000509506 930 ntBASIC4.29□□□□□ -1.72
TO15178 MYL12AP1-201ENST00000518490 515 ntBASIC4.29□□□□□ -1.72
TO15178 OR5M2P-201ENST00000529003 936 ntBASIC4.29□□□□□ -1.72
TO15178 OR8K4P-201ENST00000534608 872 ntBASIC4.29□□□□□ -1.72
TO15178 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.29□□□□□ -1.72
TO15178 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.29□□□□□ -1.72
TO15178 AC079075.1-201ENST00000559543 878 ntBASIC4.29□□□□□ -1.72
TO15178 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.29□□□□□ -1.72
TO15178 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.29□□□□□ -1.72
TO15178 AC008536.1-201ENST00000602872 669 ntBASIC4.29□□□□□ -1.72
TO15178 AC083899.3-201ENST00000603413 594 ntBASIC4.29□□□□□ -1.72
TO15178 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 AP000238.1-201ENST00000608759 426 ntBASIC4.29□□□□□ -1.72
TO15178 AC099676.1-201ENST00000608886 657 ntBASIC4.29□□□□□ -1.72
TO15178 AC116651.1-201ENST00000609724 556 ntBASIC4.29□□□□□ -1.72
TO15178 AL161616.1-201ENST00000611867 286 ntBASIC4.29□□□□□ -1.72
TO15178 AC099669.2-201ENST00000616549 437 ntBASIC4.29□□□□□ -1.72
TO15178 AC010975.3-201ENST00000618727 978 ntBASIC4.29□□□□□ -1.72
TO15178 AL359757.1-201ENST00000623176 255 ntBASIC4.29□□□□□ -1.72
TO15178 U3.53-201ENST00000628922 216 ntBASIC4.29□□□□□ -1.72
TO15178 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TO15178 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TO15178 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.29□□□□□ -1.72
TO15178 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TO15178 MTND4P26-201ENST00000415971 1359 ntBASIC4.28□□□□□ -1.72
TO15178 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TO15178 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
TO15178 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
TO15178 DCAF13P3-201ENST00000561147 1334 ntBASIC4.28□□□□□ -1.72
TO15178 OR11H5P-202ENST00000641612 1325 ntBASIC4.28□□□□□ -1.72
TO15178 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TO15178 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 AC079741.1-201ENST00000321498 212 ntBASIC4.28□□□□□ -1.72
TO15178 SNORA70F-201ENST00000384142 135 ntBASIC4.28□□□□□ -1.72
TO15178 SNORD116-12-201ENST00000384468 92 ntBASIC4.28□□□□□ -1.72
TO15178 MIR124-3-201ENST00000384866 87 ntBASIC4.28□□□□□ -1.72
TO15178 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 RNU6-272P-201ENST00000411028 104 ntBASIC4.28□□□□□ -1.72
TO15178 RPS3AP25-201ENST00000411660 793 ntBASIC4.28□□□□□ -1.72
TO15178 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
TO15178 OR51A3P-201ENST00000413596 924 ntBASIC4.28□□□□□ -1.72
TO15178 AL590139.1-201ENST00000416267 400 ntBASIC4.28□□□□□ -1.72
TO15178 C1DP1-201ENST00000426049 402 ntBASIC4.28□□□□□ -1.72
TO15178 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.28□□□□□ -1.72
TO15178 AL121877.1-201ENST00000453704 622 ntBASIC4.28□□□□□ -1.72
TO15178 ISCUP1-201ENST00000454451 448 ntBASIC4.28□□□□□ -1.72
TO15178 AC092155.2-201ENST00000454675 477 ntBASIC4.28□□□□□ -1.72
TO15178 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.28□□□□□ -1.72
TO15178 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 SCARNA10-201ENST00000459255 330 ntBASIC4.28□□□□□ -1.72
TO15178 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 AP000926.1-201ENST00000479573 241 ntBASIC4.28□□□□□ -1.72
TO15178 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.28□□□□□ -1.72
TO15178 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 MTND4LP2-201ENST00000502312 285 ntBASIC4.28□□□□□ -1.72
TO15178 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
TO15178 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.28□□□□□ -1.72
TO15178 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
TO15178 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms