Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTND3P19-201ENST00000603825 345 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL031320.1-201ENST00000604177 357 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL390816.3-201ENST00000604527 1066 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL162431.4-201ENST00000604674 411 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC015871.5-202ENST00000623252 701 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC021242.1-201ENST00000507315 2035 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
TRIM38O00635 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM38O00635 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM38O00635 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TRIM38O00635 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 AC006210.2-201ENST00000367074 1545 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 RNU4-24P-201ENST00000364565 139 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 RNA5SP428-201ENST00000365129 132 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM38O00635 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM38O00635 AC119751.3-201ENST00000399720 670 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM38O00635 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM38O00635 AC016397.1-201ENST00000412463 242 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL450992.3-201ENST00000413192 568 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM38O00635 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM38O00635 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM38O00635 MTND2P4-201ENST00000445034 1004 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC104306.1-201ENST00000449702 371 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM38O00635 PNPLA4P1-201ENST00000458328 305 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL591473.1-201ENST00000464297 313 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 CCDC75P1-201ENST00000469247 791 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 MTND6P6-201ENST00000478031 263 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 DYNLL1P6-201ENST00000503440 264 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 OR7H2P-201ENST00000513483 306 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AP001207.1-201ENST00000524051 481 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 MTCYBP20-201ENST00000524239 1129 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC063949.1-201ENST00000552900 865 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM38O00635 AADACP1-206ENST00000561502 1193 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
TRIM38O00635 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM38O00635 RN7SL52P-201ENST00000584271 284 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL353778.1-201ENST00000603149 408 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 AC008814.1-201ENST00000603797 406 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 MEMO1P5-201ENST00000604810 406 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL158042.1-201ENST00000605338 460 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC018695.5-201ENST00000605872 315 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AP002360.4-201ENST00000606980 481 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC007349.4-201ENST00000608114 532 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 RN7SL722P-201ENST00000617780 284 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 RN7SL565P-201ENST00000618246 284 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL158163.2-201ENST00000619110 700 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AC022106.2-201ENST00000620114 757 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM38O00635 AC090582.1-201ENST00000636321 199 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 AL031119.1-201ENST00000404707 1879 ntBASIC5.04□□□□□ -1.6
TRIM38O00635 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
TRIM38O00635 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM38O00635 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM38O00635 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM38O00635 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM38O00635 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM38O00635 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM38O00635 MIR217-201ENST00000384817 110 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 RNU6-1242P-201ENST00000391052 103 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC013442.1-201ENST00000397347 228 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AL139098.1-201ENST00000407291 389 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM38O00635 PRELID3BP11-201ENST00000414230 479 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM38O00635 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM38O00635 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 MTCYBP39-201ENST00000437562 491 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 PRPF38AP2-201ENST00000438179 851 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM38O00635 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM38O00635 TPT1P13-201ENST00000449760 499 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AL591623.2-201ENST00000449978 222 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM38O00635 AC011979.1-201ENST00000472300 483 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM38O00635 RN7SL244P-201ENST00000493405 297 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 AC008897.1-201ENST00000494006 347 ntBASIC5.03□□□□□ -1.6
TRIM38O00635 CEACAMP10-202ENST00000495431 496 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms