Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RPL31P35-201ENST00000431058 377 ntBASIC6.22□□□□□ -1.41
SOX1O00570 RPL17P49-201ENST00000443728 411 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC012512.1-201ENST00000446594 718 ntBASIC6.22□□□□□ -1.41
SOX1O00570 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 RPS26P24-201ENST00000497656 331 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC114967.1-201ENST00000504890 259 ntBASIC6.22□□□□□ -1.41
SOX1O00570 RNU6-445P-201ENST00000516949 107 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 AC022690.1-201ENST00000526681 550 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC090424.1-201ENST00000535243 736 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC011611.1-201ENST00000552179 197 ntBASIC6.22□□□□□ -1.41
SOX1O00570 PSMA3P-201ENST00000555485 635 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC090751.1-201ENST00000566966 267 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.22□□□□□ -1.41
SOX1O00570 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 RMST_3.1-201ENST00000611651 109 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AL139099.4-201ENST00000614802 114 ntBASIC6.22□□□□□ -1.41
SOX1O00570 AC068722.2-201ENST00000618734 544 ntBASIC6.22□□□□□ -1.41
SOX1O00570 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SOX1O00570 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SOX1O00570 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
SOX1O00570 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SOX1O00570 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SOX1O00570 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SOX1O00570 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.22□□□□□ -1.41
SOX1O00570 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.21□□□□□ -1.41
SOX1O00570 AC092821.2-201ENST00000545710 2042 ntBASIC6.21□□□□□ -1.41
SOX1O00570 AC090229.1-201ENST00000590983 1609 ntBASIC6.21□□□□□ -1.41
SOX1O00570 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.21□□□□□ -1.41
SOX1O00570 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
SOX1O00570 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SOX1O00570 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.21□□□□□ -1.41
SOX1O00570 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.21□□□□□ -1.41
SOX1O00570 RNF6P1-201ENST00000444889 1784 ntBASIC6.21□□□□□ -1.41
SOX1O00570 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
SOX1O00570 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SOX1O00570 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.21□□□□□ -1.41
SOX1O00570 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 MFSD8-216ENST00000641147 4009 ntBASIC6.21□□□□□ -1.42
SOX1O00570 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SOX1O00570 AC016251.2-201ENST00000623393 3089 ntBASIC6.21□□□□□ -1.42
SOX1O00570 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SOX1O00570 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 OR52B1P-201ENST00000316506 909 ntBASIC6.21□□□□□ -1.42
SOX1O00570 RNU1-24P-201ENST00000364285 165 ntBASIC6.21□□□□□ -1.42
SOX1O00570 SNORA70.2-201ENST00000364506 135 ntBASIC6.21□□□□□ -1.42
SOX1O00570 RNU1-43P-201ENST00000365052 165 ntBASIC6.21□□□□□ -1.42
SOX1O00570 RNU6-398P-201ENST00000384143 109 ntBASIC6.21□□□□□ -1.42
SOX1O00570 DUTP5-201ENST00000406790 469 ntBASIC6.21□□□□□ -1.42
SOX1O00570 GAPDHP42-201ENST00000406848 981 ntBASIC6.21□□□□□ -1.42
SOX1O00570 U3.36-201ENST00000408418 213 ntBASIC6.21□□□□□ -1.42
SOX1O00570 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.21□□□□□ -1.42
SOX1O00570 RNU6-272P-201ENST00000411028 104 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AL357752.1-201ENST00000412817 349 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.21□□□□□ -1.42
SOX1O00570 RAD23BP1-201ENST00000421404 1227 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AL353193.1-201ENST00000421444 268 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 AL353729.1-201ENST00000425044 720 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 DYNLL1P7-201ENST00000429273 258 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AL365400.1-201ENST00000431854 640 ntBASIC6.21□□□□□ -1.42
SOX1O00570 RPEP2-201ENST00000432149 701 ntBASIC6.21□□□□□ -1.42
SOX1O00570 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 SEPT14P3-201ENST00000439401 183 ntBASIC6.21□□□□□ -1.42
SOX1O00570 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 AL732372.2-207ENST00000445840 183 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.21□□□□□ -1.42
SOX1O00570 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.21□□□□□ -1.42
SOX1O00570 SEPT14P2-201ENST00000453405 183 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC104164.1-201ENST00000460282 590 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SOX1O00570 AC091180.1-201ENST00000462104 372 ntBASIC6.21□□□□□ -1.42
SOX1O00570 SEPT14P4-201ENST00000513445 186 ntBASIC6.21□□□□□ -1.42
SOX1O00570 Y_RNA.672-201ENST00000516289 104 ntBASIC6.21□□□□□ -1.42
SOX1O00570 AC021678.3-201ENST00000517893 476 ntBASIC6.21□□□□□ -1.42
SOX1O00570 FO082796.1-201ENST00000523795 183 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms