Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC092832.1-201ENST00000422934 400 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 NPM1P34-201ENST00000428821 893 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 RPL7P28-201ENST00000437739 740 ntBASIC3.17□□□□□ -1.9
UPK2O00526 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK2O00526 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.17□□□□□ -1.9
UPK2O00526 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK2O00526 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK2O00526 AC090543.1-201ENST00000492168 485 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC012170.1-201ENST00000495139 359 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 BTF3L4P4-201ENST00000506381 449 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC106806.2-201ENST00000509365 500 ntBASIC3.17□□□□□ -1.9
UPK2O00526 RNA5SP143-201ENST00000516936 115 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 AP003730.1-201ENST00000524605 285 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 CYCSP29-201ENST00000533731 318 ntBASIC3.17□□□□□ -1.9
UPK2O00526 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 EIF1P6-201ENST00000600054 334 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC068790.4-201ENST00000602474 263 ntBASIC3.17□□□□□ -1.9
UPK2O00526 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 MTCO3P22-201ENST00000603219 784 ntBASIC3.17□□□□□ -1.9
UPK2O00526 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 U6.48-201ENST00000618523 106 ntBASIC3.17□□□□□ -1.9
UPK2O00526 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 AC053481.2-202ENST00000582394 1500 ntBASIC3.17□□□□□ -1.9
UPK2O00526 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 AL031985.3-201ENST00000565390 2449 ntBASIC3.17□□□□□ -1.9
UPK2O00526 NCAPGP1-201ENST00000505112 1814 ntBASIC3.16□□□□□ -1.9
UPK2O00526 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UPK2O00526 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 RNA5SP399-201ENST00000364003 117 ntBASIC3.16□□□□□ -1.9
UPK2O00526 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK2O00526 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 ENSAP1-201ENST00000392855 326 ntBASIC3.16□□□□□ -1.9
UPK2O00526 HLFP1-201ENST00000402375 499 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AC234782.4-201ENST00000417646 1048 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK2O00526 COX6CP15-201ENST00000426313 211 ntBASIC3.16□□□□□ -1.9
UPK2O00526 MRPL50P1-201ENST00000431951 384 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.16□□□□□ -1.9
UPK2O00526 UBE2V2P3-201ENST00000433562 437 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK2O00526 MRPS33P4-201ENST00000434892 317 ntBASIC3.16□□□□□ -1.9
UPK2O00526 MTCYBP21-201ENST00000443300 1113 ntBASIC3.16□□□□□ -1.9
UPK2O00526 RANP8-201ENST00000444720 713 ntBASIC3.16□□□□□ -1.9
UPK2O00526 RPS11P1-201ENST00000451072 473 ntBASIC3.16□□□□□ -1.9
UPK2O00526 SNORD108-201ENST00000459332 71 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
UPK2O00526 HMGB1P21-201ENST00000502313 581 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AC004069.2-201ENST00000505438 1114 ntBASIC3.16□□□□□ -1.9
UPK2O00526 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK2O00526 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.16□□□□□ -1.9
UPK2O00526 AC005798.1-201ENST00000513715 387 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK2O00526 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK2O00526 AC009643.1-201ENST00000532030 391 ntBASIC3.16□□□□□ -1.9
UPK2O00526 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK2O00526 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK2O00526 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.16□□□□□ -1.9
UPK2O00526 MIR4330-201ENST00000579077 105 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK2O00526 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK2O00526 MIR3138-201ENST00000585238 82 ntBASIC3.16□□□□□ -1.9
UPK2O00526 AL133247.2-201ENST00000603236 482 ntBASIC3.16□□□□□ -1.9
UPK2O00526 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
UPK2O00526 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK2O00526 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK2O00526 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK2O00526 GTF2H2B-203ENST00000508065 1432 ntBASIC3.16□□□□□ -1.9
UPK2O00526 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UPK2O00526 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK2O00526 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms