Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 RPL23AP72-201ENST00000492447 435 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AC108145.1-201ENST00000503770 153 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AC111193.1-201ENST00000504097 155 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC008802.1-201ENST00000519121 791 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.07□□□□□ -1.76
PDLIM1O00151 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.07□□□□□ -1.76
PDLIM1O00151 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC018618.2-201ENST00000604770 446 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AP001033.2-201ENST00000609701 1003 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC123768.4-201ENST00000616244 701 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AP000346.3-201ENST00000622821 210 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 AC116563.2-201ENST00000624751 535 ntBASIC4.07□□□□□ -1.76
PDLIM1O00151 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PDLIM1O00151 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM1O00151 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM1O00151 AC022893.2-201ENST00000564832 3296 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 GTF2H2B-203ENST00000508065 1432 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC00561-201ENST00000565815 2738 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDLIM1O00151 RNU6-252P-201ENST00000363232 107 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 SNORA71.2-201ENST00000364941 134 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDLIM1O00151 SNORA40.4-201ENST00000390971 128 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC013404.1-201ENST00000413068 249 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AL031663.1-201ENST00000437445 219 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 RPL23AP93-201ENST00000440847 484 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC097499.1-201ENST00000444277 208 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 RPL23AP43-201ENST00000446445 471 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 CFTRP1-201ENST00000456646 183 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 RPS27AP17-201ENST00000463344 455 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 RPL9P32-201ENST00000464118 620 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 RN7SL354P-201ENST00000469282 294 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 OR52A4P-201ENST00000472867 958 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AP000893.1-201ENST00000474462 794 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC005798.1-201ENST00000513715 387 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC022790.1-201ENST00000522872 204 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 MIR4458-201ENST00000578872 75 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AC020910.2-201ENST00000603635 610 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AC100847.1-201ENST00000611316 481 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 AC012531.5-201ENST00000611375 151 ntBASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.06□□□□□ -1.76
PDLIM1O00151 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDLIM1O00151 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PDLIM1O00151 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDLIM1O00151 IGKV7-3-201ENST00000357453 298 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 EIF2S2P3-201ENST00000428356 999 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 RPL23AP1-201ENST00000428990 471 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 CEACAMP9-201ENST00000442990 513 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 RNFT1P2-201ENST00000443064 757 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AC092685.1-201ENST00000447960 1243 ntBASIC4.05□□□□□ -1.76
PDLIM1O00151 AL162591.2-201ENST00000449634 317 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms