Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC011411.1-201ENST00000509592 876 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 SCARNA21.2-201ENST00000516600 166 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 RNA5SP135-201ENST00000517019 125 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC087808.1-201ENST00000520501 361 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC010201.1-201ENST00000605051 540 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC023813.4-201ENST00000607580 580 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AL512506.2-201ENST00000624472 458 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 MIR3974-201ENST00000637126 96 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 PCAT14-202ENST00000627127 3935 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AC083843.3-201ENST00000623679 2186 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 AP000776.1-201ENST00000530032 1663 ntBASIC4.64□□□□□ -1.67
TCRBV7S3A2A0A539 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SKP149-201ENST00000363008 344 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RNU6-249P-201ENST00000363016 102 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SKP115-201ENST00000363177 317 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 TMSB4XP8-201ENST00000402089 135 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 SPTLC1P2-201ENST00000407089 121 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SKP267-201ENST00000410381 285 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RNU4-72P-201ENST00000410754 173 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 TMSB4XP6-201ENST00000415187 135 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC009518.2-201ENST00000418056 731 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 GNG5P5-201ENST00000420444 220 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 TMSB4XP1-201ENST00000424567 135 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AL365396.1-201ENST00000430854 671 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RPL36AP15-201ENST00000444514 266 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC104306.1-201ENST00000449702 371 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC104763.1-201ENST00000475274 360 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC108734.3-201ENST00000481241 1165 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 BET1P1-201ENST00000482276 359 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 WBP1LP4-201ENST00000505043 344 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 OR5M14P-201ENST00000506803 618 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC008885.2-201ENST00000509506 930 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC116353.3-201ENST00000511215 249 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 HIGD1AP6-201ENST00000521833 279 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 MTCO1P47-201ENST00000523889 1271 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 OR5M2P-201ENST00000529003 936 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC005832.3-201ENST00000537929 631 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 MIR3667-201ENST00000581025 74 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AL451074.6-201ENST00000608512 729 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AL392048.1-201ENST00000613946 534 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC090510.2-201ENST00000617465 629 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AL603755.1-201ENST00000619504 163 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 U3.53-201ENST00000628922 216 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TCRBV7S3A2A0A539 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms