Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
TRBV5-3A0A0A0MS03 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRBV5-3A0A0A0MS03 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC068870.3-201ENST00000625077 2536 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC005005.4-201ENST00000623789 16698 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AL353743.4-201ENST00000422653 1547 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 MIR323A-201ENST00000362199 86 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RNU4-75P-201ENST00000364621 146 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RNU6-1300P-201ENST00000391046 108 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 SNORA26.8-201ENST00000391306 124 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 U3.30-201ENST00000391308 210 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RN7SKP273-201ENST00000411392 314 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AL445213.1-201ENST00000412589 747 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 VDAC1P9-201ENST00000412766 841 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 MTCO3P41-201ENST00000414801 328 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 REREP1Y-201ENST00000422655 198 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 SETP9-201ENST00000423837 832 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 CHEK2P5-201ENST00000423877 246 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 MTCO3P30-201ENST00000426425 670 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 MTCYBP39-201ENST00000437562 491 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 REREP2Y-201ENST00000439103 200 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 YWHAQP9-201ENST00000445891 512 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AP000936.2-201ENST00000447151 681 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AL034418.1-201ENST00000448675 860 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RN7SL172P-201ENST00000460535 303 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC117394.1-201ENST00000477323 567 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC079841.1-201ENST00000481228 950 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RN7SL214P-201ENST00000487317 265 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC048346.1-201ENST00000510247 144 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC109471.1-201ENST00000511631 612 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 TCP11X3P-202ENST00000514289 1254 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 Y_RNA.695-201ENST00000516715 107 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 HIGD1AP10-201ENST00000527837 282 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 CYCSP28-201ENST00000534284 321 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC092490.3-201ENST00000545370 572 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 GSTP1P1-201ENST00000548078 319 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC007599.1-201ENST00000568688 1174 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC011260.1-201ENST00000578420 472 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RSL24D1P11-201ENST00000591045 491 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RPL7P50-201ENST00000600588 727 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC073544.2-201ENST00000601155 540 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC080078.2-201ENST00000603766 501 ntBASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRBV5-3A0A0A0MS03 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.46□□□□□ -1.69
TRBV5-3A0A0A0MS03 MAPK10-304ENST00000641341 3984 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 AC099654.2-201ENST00000433031 1980 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNU5D-1-201ENST00000363299 116 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SNORA74A-201ENST00000364089 198 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 RNU6-621P-201ENST00000364752 109 ntBASIC4.46□□□□□ -1.7
TRBV5-3A0A0A0MS03 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms