Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 KRT8P9-201ENST00000558927 1449 ntBASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.85■□□□□ 0.45
NPIPA1Q9UND3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
NPIPA1Q9UND3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 AC116351.2-201ENST00000606540 1585 ntBASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.83■□□□□ 0.45
NPIPA1Q9UND3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 TMPOP1-202ENST00000424642 1267 ntBASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPIPA1Q9UND3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 AC018553.1-201ENST00000616682 1458 ntBASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 AL390955.1-201ENST00000428694 934 ntBASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 AC116562.2-201ENST00000507042 360 ntBASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 TMEM179-206ENST00000616017 1645 ntBASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NPIPA1Q9UND3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms