Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 FEM1AP1-201ENST00000431297 1995 ntBASIC20.57■□□□□ 0.88
CHD7Q9P2D1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CHD7Q9P2D1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 MIR4674-201ENST00000582457 87 ntBASIC20.55■□□□□ 0.88
CHD7Q9P2D1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD7Q9P2D1 AC007225.1-201ENST00000566331 1836 ntBASIC20.55■□□□□ 0.88
CHD7Q9P2D1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 AL160237.2-201ENST00000556165 472 ntBASIC20.54■□□□□ 0.88
CHD7Q9P2D1 AC011498.5-201ENST00000592027 486 ntBASIC20.54■□□□□ 0.88
CHD7Q9P2D1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 AL162741.1-201ENST00000565563 1558 ntBASIC20.54■□□□□ 0.88
CHD7Q9P2D1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHD7Q9P2D1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD7Q9P2D1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 AC012615.1-201ENST00000565797 1299 ntBASIC20.52■□□□□ 0.88
CHD7Q9P2D1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD7Q9P2D1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms