Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 UNC93B7-201ENST00000509439 705 ntBASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 AL512604.3-201ENST00000569583 964 ntBASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC073314.1-201ENST00000568729 2216 ntBASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 AL512408.1-201ENST00000569378 2000 ntBASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP4-1Q9BYQ7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 AP001271.2-201ENST00000624018 1556 ntBASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 HBZP1-201ENST00000354915 429 ntBASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC020907.5-201ENST00000624372 1936 ntBASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP4-1Q9BYQ7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 MIR3180-1-201ENST00000580374 94 ntBASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 MIR3180-3-201ENST00000584616 94 ntBASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.04□□□□□ -0.8
KRTAP4-1Q9BYQ7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms