Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.97■□□□□ 0.95
LRCH3Q96II8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH3Q96II8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.97■□□□□ 0.95
LRCH3Q96II8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.97■□□□□ 0.95
LRCH3Q96II8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH3Q96II8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH3Q96II8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH3Q96II8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH3Q96II8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH3Q96II8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH3Q96II8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH3Q96II8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH3Q96II8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 AC092597.1-201ENST00000487352 616 ntBASIC20.96■□□□□ 0.95
LRCH3Q96II8 KRT18P31-201ENST00000506277 1292 ntBASIC20.96■□□□□ 0.95
LRCH3Q96II8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.96■□□□□ 0.95
LRCH3Q96II8 IL9RP2-201ENST00000423948 1312 ntBASIC20.96■□□□□ 0.95
LRCH3Q96II8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH3Q96II8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH3Q96II8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH3Q96II8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRCH3Q96II8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
LRCH3Q96II8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 RASA4DP-201ENST00000460726 1199 ntBASIC20.95■□□□□ 0.94
LRCH3Q96II8 CA15P1-201ENST00000481698 905 ntBASIC20.95■□□□□ 0.94
LRCH3Q96II8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH3Q96II8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH3Q96II8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 KRT8P20-201ENST00000423953 1409 ntBASIC20.94■□□□□ 0.94
LRCH3Q96II8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH3Q96II8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LRCH3Q96II8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
LRCH3Q96II8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.93■□□□□ 0.94
LRCH3Q96II8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.93■□□□□ 0.94
LRCH3Q96II8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.93■□□□□ 0.94
LRCH3Q96II8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 KRT16P4-201ENST00000453883 522 ntBASIC20.93■□□□□ 0.94
LRCH3Q96II8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.93■□□□□ 0.94
LRCH3Q96II8 POLD2P1-201ENST00000511220 997 ntBASIC20.93■□□□□ 0.94
LRCH3Q96II8 NEK4P2-201ENST00000580004 1012 ntBASIC20.93■□□□□ 0.94
LRCH3Q96II8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.93■□□□□ 0.94
LRCH3Q96II8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH3Q96II8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms