Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 HYMAI.1-201ENST00000620949 238 ntBASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LYSMD4Q5XG99 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LYSMD4Q5XG99 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 ATP5G2P1-201ENST00000433580 426 ntBASIC19■□□□□ 0.63
LYSMD4Q5XG99 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 AC012313.10-201ENST00000623509 926 ntBASIC19■□□□□ 0.63
LYSMD4Q5XG99 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 AC133561.1-201ENST00000568600 2415 ntBASIC19■□□□□ 0.63
LYSMD4Q5XG99 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LYSMD4Q5XG99 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LYSMD4Q5XG99 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 SPDYE15P-201ENST00000424157 909 ntBASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 AC026310.3-201ENST00000625186 2373 ntBASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LYSMD4Q5XG99 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.98■□□□□ 0.63
LYSMD4Q5XG99 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms