Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC139887.4-201ENST00000607877 719 ntBASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 AC010653.2-201ENST00000623505 997 ntBASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNFT1Q5M7Z0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 AL353719.1-201ENST00000566847 864 ntBASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNFT1Q5M7Z0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 KRT8P11-201ENST00000409686 1436 ntBASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 TSPY17P-201ENST00000450329 467 ntBASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNFT1Q5M7Z0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 AC063952.2-201ENST00000498792 1227 ntBASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 AC087388.1-201ENST00000571370 1112 ntBASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNFT1Q5M7Z0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNFT1Q5M7Z0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.39■□□□□ 0.38
RNFT1Q5M7Z0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms