Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
ERVFC1P60507 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
ERVFC1P60507 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.4■□□□□ 0.86
ERVFC1P60507 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ERVFC1P60507 LINC01311-201ENST00000565162 1445 ntBASIC20.4■□□□□ 0.86
ERVFC1P60507 NEK4P2-201ENST00000580004 1012 ntBASIC20.4■□□□□ 0.86
ERVFC1P60507 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.4■□□□□ 0.86
ERVFC1P60507 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.4■□□□□ 0.86
ERVFC1P60507 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 AC012313.10-201ENST00000623509 926 ntBASIC20.4■□□□□ 0.86
ERVFC1P60507 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERVFC1P60507 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.4■□□□□ 0.86
ERVFC1P60507 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ERVFC1P60507 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ERVFC1P60507 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.39■□□□□ 0.86
ERVFC1P60507 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
ERVFC1P60507 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ERVFC1P60507 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.39■□□□□ 0.85
ERVFC1P60507 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 SPDYE15P-201ENST00000424157 909 ntBASIC20.39■□□□□ 0.85
ERVFC1P60507 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.39■□□□□ 0.85
ERVFC1P60507 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.39■□□□□ 0.85
ERVFC1P60507 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.39■□□□□ 0.85
ERVFC1P60507 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.39■□□□□ 0.85
ERVFC1P60507 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.39■□□□□ 0.85
ERVFC1P60507 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.39■□□□□ 0.85
ERVFC1P60507 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.39■□□□□ 0.85
ERVFC1P60507 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.39■□□□□ 0.85
ERVFC1P60507 AC020907.5-201ENST00000624372 1936 ntBASIC20.39■□□□□ 0.85
ERVFC1P60507 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERVFC1P60507 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 AL691432.2-201ENST00000607222 2038 ntBASIC20.38■□□□□ 0.85
ERVFC1P60507 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.38■□□□□ 0.85
ERVFC1P60507 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.38■□□□□ 0.85
ERVFC1P60507 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.38■□□□□ 0.85
ERVFC1P60507 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ERVFC1P60507 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.38■□□□□ 0.85
ERVFC1P60507 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ERVFC1P60507 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ERVFC1P60507 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
ERVFC1P60507 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERVFC1P60507 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.38■□□□□ 0.85
ERVFC1P60507 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.38■□□□□ 0.85
ERVFC1P60507 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERVFC1P60507 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERVFC1P60507 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ERVFC1P60507 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ERVFC1P60507 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.37■□□□□ 0.85
ERVFC1P60507 MIR4674-201ENST00000582457 87 ntBASIC20.37■□□□□ 0.85
ERVFC1P60507 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.37■□□□□ 0.85
ERVFC1P60507 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERVFC1P60507 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ERVFC1P60507 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.37■□□□□ 0.85
ERVFC1P60507 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.37■□□□□ 0.85
ERVFC1P60507 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERVFC1P60507 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
ERVFC1P60507 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.36■□□□□ 0.85
ERVFC1P60507 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERVFC1P60507 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.36■□□□□ 0.85
ERVFC1P60507 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.36■□□□□ 0.85
ERVFC1P60507 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERVFC1P60507 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERVFC1P60507 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERVFC1P60507 SPDYE13P-201ENST00000445314 798 ntBASIC20.36■□□□□ 0.85
ERVFC1P60507 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms